Closed lnikon closed 3 years ago
Please see branch containing partially complete conversions. https://github.com/pnnl/chgl/tree/1.23-port
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-------- Original message -------- From: Vahag Bejanyan notifications@github.com Date: 10/25/20 3:49 AM (GMT-05:00) To: pnnl/chgl chgl@noreply.github.com Cc: Subscribed subscribed@noreply.github.com Subject: [pnnl/chgl] Unable to build with Chapel 1.22.1 (#79)
Can't build any of unit tests inside chgl/test.
$ chpl --version
chpl version 1.22.1 Copyright 2020 Hewlett Packard Enterprise Development LP Copyright 2004-2019 Cray Inc. (See LICENSE file for more details)
Trying to build with the following command: $ chpl -M ../src --no-lifetime-checking --no-warnings GraphTest.chpl
Getting following output:
GraphTest.chpl:5: error: Attempt to 'new' a function or undefined symbol ../src/BinReader.chpl:16: In function 'binToHypergraph': ../src/BinReader.chpl:32: error: Attempt to 'new' a function or undefined symbol ../src/BinReader.chpl:73: In function 'binToGraph': ../src/BinReader.chpl:89: error: Attempt to 'new' a function or undefined symbol ../src/Metrics.chpl:113: In function 'getVertexComponentMappings': ../src/Metrics.chpl:118: error: Attempt to 'new' a function or undefined symbol ../src/Metrics.chpl:119: error: Attempt to 'new' a function or undefined symbol ../src/Metrics.chpl:199: In function 'getEdgeComponentMappings': ../src/Metrics.chpl:202: error: Attempt to 'new' a function or undefined symbol ../src/Metrics.chpl:203: error: Attempt to 'new' a function or undefined symbol ../src/Generation.chpl:268: In function 'generateChungLu': ../src/Generation.chpl:306: error: Attempt to 'new' a function or undefined symbol ../src/Generation.chpl:464: In function 'generateBTER': ../src/Generation.chpl:494: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:10: In iterator 'vertexBFS': ../src/Traversal.chpl:12: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:25: In iterator 'vertexBFS': ../src/Traversal.chpl:27: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:28: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:28: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:45: In iterator 'edgeBFS': ../src/Traversal.chpl:47: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:60: In iterator 'edgeBFS': ../src/Traversal.chpl:62: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:63: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:63: error: Attempt to 'new' a function or undefined symbol ../src/Visualize.chpl:152: In function 'main': ../src/Visualize.chpl:153: error: Attempt to 'new' a function or undefined symbol ../src/WorkQueue.chpl:28: In iterator 'doWorkLoop': ../src/WorkQueue.chpl:29: error: Attempt to 'new' a function or undefined symbol ../src/WorkQueue.chpl:244: In initializer: ../src/WorkQueue.chpl:247: error: Attempt to 'new' a function or undefined symbol ../src/WorkQueue.chpl:249: error: Attempt to 'new' a function or undefined symbol ../src/WorkQueue.chpl:251: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:187: In function 'readWriteThis': ../src/AggregationBuffer.chpl:188: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:190: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:192: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:194: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:196: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:198: error: Attempt to 'new' a function or undefined symbol ../src/AdjListHyperGraph.chpl:441: In initializer: ../src/AdjListHyperGraph.chpl:432: error: 'Lock' undeclared (first use this function) ../src/AdjListHyperGraph.chpl:478: In function 'equals': ../src/AdjListHyperGraph.chpl:491: error: 'Utilities' undeclared (first use this function) ../src/BinReader.chpl:16: In function 'binToHypergraph': ../src/BinReader.chpl:62: error: 'ssize_t' undeclared (first use this function) ../src/Utilities.chpl:374: error: 'size_t' undeclared (first use this function) ../src/Utilities.chpl:375: error: 'c_int' undeclared (first use this function) ../src/Utilities.chpl:507: In iterator 'getLines': ../src/Utilities.chpl:508: error: 'iomode' undeclared (first use this function) ../src/Visualize.chpl:4: In function 'visualize': ../src/Visualize.chpl:4: error: 'Graph' undeclared (first use this function) ../src/Visualize.chpl:6: error: 'iomode' undeclared (first use this function) ../src/Visualize.chpl:43: In function 'visualize': ../src/Visualize.chpl:43: error: 'AdjListHyperGraph' undeclared (first use this function) ../src/WorkQueue.chpl:16: In iterator 'doWorkLoop': ../src/WorkQueue.chpl:16: error: 'TerminationDetector' undeclared (first use this function)
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Yes – CHGL currently only supports Chapel 1.20.
Also please be aware CHGL is research code that will not have the full performance you might expect in the distributed case. It has been developed from 2018 to 2020 and is an effort that was useful in providing feedback to the Chapel language team at HPE Cray.
Active CHGL development by our team is planned to end shortly.
From: Louis Jenkins notifications@github.com Sent: Sunday, October 25, 2020 5:53 AM To: pnnl/chgl chgl@noreply.github.com Cc: Subscribed subscribed@noreply.github.com Subject: Re: [pnnl/chgl] Unable to build with Chapel 1.22.1 and 1.22.0 (#79)
Please see branch containing partially complete conversions. https://github.com/pnnl/chgl/tree/1.23-port
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-------- Original message -------- From: Vahag Bejanyan <notifications@github.com mailto:notifications@github.com > Date: 10/25/20 3:49 AM (GMT-05:00) To: pnnl/chgl <chgl@noreply.github.com mailto:chgl@noreply.github.com > Cc: Subscribed <subscribed@noreply.github.com mailto:subscribed@noreply.github.com > Subject: [pnnl/chgl] Unable to build with Chapel 1.22.1 (#79)
Can't build any of unit tests inside chgl/test.
$ chpl --version
chpl version 1.22.1 Copyright 2020 Hewlett Packard Enterprise Development LP Copyright 2004-2019 Cray Inc. (See LICENSE file for more details)
Trying to build with the following command: $ chpl -M ../src --no-lifetime-checking --no-warnings GraphTest.chpl
Getting following output:
GraphTest.chpl:5: error: Attempt to 'new' a function or undefined symbol ../src/BinReader.chpl:16: In function 'binToHypergraph': ../src/BinReader.chpl:32: error: Attempt to 'new' a function or undefined symbol ../src/BinReader.chpl:73: In function 'binToGraph': ../src/BinReader.chpl:89: error: Attempt to 'new' a function or undefined symbol ../src/Metrics.chpl:113: In function 'getVertexComponentMappings': ../src/Metrics.chpl:118: error: Attempt to 'new' a function or undefined symbol ../src/Metrics.chpl:119: error: Attempt to 'new' a function or undefined symbol ../src/Metrics.chpl:199: In function 'getEdgeComponentMappings': ../src/Metrics.chpl:202: error: Attempt to 'new' a function or undefined symbol ../src/Metrics.chpl:203: error: Attempt to 'new' a function or undefined symbol ../src/Generation.chpl:268: In function 'generateChungLu': ../src/Generation.chpl:306: error: Attempt to 'new' a function or undefined symbol ../src/Generation.chpl:464: In function 'generateBTER': ../src/Generation.chpl:494: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:10: In iterator 'vertexBFS': ../src/Traversal.chpl:12: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:25: In iterator 'vertexBFS': ../src/Traversal.chpl:27: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:28: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:28: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:45: In iterator 'edgeBFS': ../src/Traversal.chpl:47: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:60: In iterator 'edgeBFS': ../src/Traversal.chpl:62: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:63: error: Attempt to 'new' a function or undefined symbol ../src/Traversal.chpl:63: error: Attempt to 'new' a function or undefined symbol ../src/Visualize.chpl:152: In function 'main': ../src/Visualize.chpl:153: error: Attempt to 'new' a function or undefined symbol ../src/WorkQueue.chpl:28: In iterator 'doWorkLoop': ../src/WorkQueue.chpl:29: error: Attempt to 'new' a function or undefined symbol ../src/WorkQueue.chpl:244: In initializer: ../src/WorkQueue.chpl:247: error: Attempt to 'new' a function or undefined symbol ../src/WorkQueue.chpl:249: error: Attempt to 'new' a function or undefined symbol ../src/WorkQueue.chpl:251: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:187: In function 'readWriteThis': ../src/AggregationBuffer.chpl:188: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:190: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:192: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:194: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:196: error: Attempt to 'new' a function or undefined symbol ../src/AggregationBuffer.chpl:198: error: Attempt to 'new' a function or undefined symbol ../src/AdjListHyperGraph.chpl:441: In initializer: ../src/AdjListHyperGraph.chpl:432: error: 'Lock' undeclared (first use this function) ../src/AdjListHyperGraph.chpl:478: In function 'equals': ../src/AdjListHyperGraph.chpl:491: error: 'Utilities' undeclared (first use this function) ../src/BinReader.chpl:16: In function 'binToHypergraph': ../src/BinReader.chpl:62: error: 'ssize_t' undeclared (first use this function) ../src/Utilities.chpl:374: error: 'size_t' undeclared (first use this function) ../src/Utilities.chpl:375: error: 'c_int' undeclared (first use this function) ../src/Utilities.chpl:507: In iterator 'getLines': ../src/Utilities.chpl:508: error: 'iomode' undeclared (first use this function) ../src/Visualize.chpl:4: In function 'visualize': ../src/Visualize.chpl:4: error: 'Graph' undeclared (first use this function) ../src/Visualize.chpl:6: error: 'iomode' undeclared (first use this function) ../src/Visualize.chpl:43: In function 'visualize': ../src/Visualize.chpl:43: error: 'AdjListHyperGraph' undeclared (first use this function) ../src/WorkQueue.chpl:16: In iterator 'doWorkLoop': ../src/WorkQueue.chpl:16: error: 'TerminationDetector' undeclared (first use this function)
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This issue is stale and should either be closed or eventually resolved.
Can't build any of unit tests inside chgl/test.
$ chpl --version
> chpl version 1.22.1 Copyright 2020 Hewlett Packard Enterprise Development LP Copyright 2004-2019 Cray Inc. (See LICENSE file for more details)
Trying to build with the following command:
$ chpl -M ../src --no-lifetime-checking --no-warnings GraphTest.chpl
Getting following output:
> GraphTest.chpl:5: error: Attempt to 'new' a function or undefined symbol
../src/BinReader.chpl:16: In function 'binToHypergraph':
../src/BinReader.chpl:32: error: Attempt to 'new' a function or undefined symbol
../src/BinReader.chpl:73: In function 'binToGraph':
../src/BinReader.chpl:89: error: Attempt to 'new' a function or undefined symbol
../src/Metrics.chpl:113: In function 'getVertexComponentMappings':
../src/Metrics.chpl:118: error: Attempt to 'new' a function or undefined symbol
../src/Metrics.chpl:119: error: Attempt to 'new' a function or undefined symbol
../src/Metrics.chpl:199: In function 'getEdgeComponentMappings':
../src/Metrics.chpl:202: error: Attempt to 'new' a function or undefined symbol
../src/Metrics.chpl:203: error: Attempt to 'new' a function or undefined symbol
../src/Generation.chpl:268: In function 'generateChungLu':
../src/Generation.chpl:306: error: Attempt to 'new' a function or undefined symbol
../src/Generation.chpl:464: In function 'generateBTER':
../src/Generation.chpl:494: error: Attempt to 'new' a function or undefined symbol
../src/Traversal.chpl:10: In iterator 'vertexBFS':
../src/Traversal.chpl:12: error: Attempt to 'new' a function or undefined symbol
../src/Traversal.chpl:25: In iterator 'vertexBFS':
../src/Traversal.chpl:27: error: Attempt to 'new' a function or undefined symbol
../src/Traversal.chpl:28: error: Attempt to 'new' a function or undefined symbol
../src/Traversal.chpl:28: error: Attempt to 'new' a function or undefined symbol
../src/Traversal.chpl:45: In iterator 'edgeBFS':
../src/Traversal.chpl:47: error: Attempt to 'new' a function or undefined symbol
../src/Traversal.chpl:60: In iterator 'edgeBFS':
../src/Traversal.chpl:62: error: Attempt to 'new' a function or undefined symbol
../src/Traversal.chpl:63: error: Attempt to 'new' a function or undefined symbol
../src/Traversal.chpl:63: error: Attempt to 'new' a function or undefined symbol
../src/Visualize.chpl:152: In function 'main':
../src/Visualize.chpl:153: error: Attempt to 'new' a function or undefined symbol
../src/WorkQueue.chpl:28: In iterator 'doWorkLoop':
../src/WorkQueue.chpl:29: error: Attempt to 'new' a function or undefined symbol
../src/WorkQueue.chpl:244: In initializer:
../src/WorkQueue.chpl:247: error: Attempt to 'new' a function or undefined symbol
../src/WorkQueue.chpl:249: error: Attempt to 'new' a function or undefined symbol
../src/WorkQueue.chpl:251: error: Attempt to 'new' a function or undefined symbol
../src/AggregationBuffer.chpl:187: In function 'readWriteThis':
../src/AggregationBuffer.chpl:188: error: Attempt to 'new' a function or undefined symbol
../src/AggregationBuffer.chpl:190: error: Attempt to 'new' a function or undefined symbol
../src/AggregationBuffer.chpl:192: error: Attempt to 'new' a function or undefined symbol
../src/AggregationBuffer.chpl:194: error: Attempt to 'new' a function or undefined symbol
../src/AggregationBuffer.chpl:196: error: Attempt to 'new' a function or undefined symbol
../src/AggregationBuffer.chpl:198: error: Attempt to 'new' a function or undefined symbol
../src/AdjListHyperGraph.chpl:441: In initializer:
../src/AdjListHyperGraph.chpl:432: error: 'Lock' undeclared (first use this function)
../src/AdjListHyperGraph.chpl:478: In function 'equals':
../src/AdjListHyperGraph.chpl:491: error: 'Utilities' undeclared (first use this function)
../src/BinReader.chpl:16: In function 'binToHypergraph':
../src/BinReader.chpl:62: error: 'ssize_t' undeclared (first use this function)
../src/Utilities.chpl:374: error: 'size_t' undeclared (first use this function)
../src/Utilities.chpl:375: error: 'c_int' undeclared (first use this function)
../src/Utilities.chpl:507: In iterator 'getLines':
../src/Utilities.chpl:508: error: 'iomode' undeclared (first use this function)
../src/Visualize.chpl:4: In function 'visualize':
../src/Visualize.chpl:4: error: 'Graph' undeclared (first use this function)
../src/Visualize.chpl:6: error: 'iomode' undeclared (first use this function)
../src/Visualize.chpl:43: In function 'visualize':
../src/Visualize.chpl:43: error: 'AdjListHyperGraph' undeclared (first use this function)
../src/WorkQueue.chpl:16: In iterator 'doWorkLoop':
../src/WorkQueue.chpl:16: error: 'TerminationDetector' undeclared (first use this function)
Update
Tried to build with Chapel 1.22.0 as described inside dependencies. Got linker errors:
/usr/bin/ld: /home/nikon/projects/chapel-1.20.0/lib/linux64/gnu/x86_64/arch-native/loc-flat/comm-none/tasks-qthreads/tmr-generic/unwind-none/mem-jemalloc/atomics-cstdlib/hwloc/re2/fs-none/lib_pic-none/libchpl.a(chpl-comm.o):(.bss+0x20): multiple definition of
/usr/bin/ld: /home/nikon/projects/chapel-1.20.0/lib/linux64/gnu/x86_64/arch-native/loc-flat/comm-none/tasks-qthreads/tmr-generic/unwind-none/mem-jemalloc/atomics-cstdlib/hwloc/re2/fs-none/lib_pic-none/libchpl.a(chpl-comm-diags.o):(.bss+0x20): multiple definition of
/usr/bin/ld: /home/nikon/projects/chapel-1.20.0/lib/linux64/gnu/x86_64/arch-native/loc-flat/comm-none/tasks-qthreads/tmr-generic/unwind-none/mem-jemalloc/atomics-cstdlib/hwloc/re2/fs-none/lib_pic-none/libchpl.a(chpl-tasks-callbacks.o):(.bss+0x0): multiple definition of
/usr/bin/ld: /home/nikon/projects/chapel-1.20.0/lib/linux64/gnu/x86_64/arch-native/loc-flat/comm-none/tasks-qthreads/tmr-generic/unwind-none/mem-jemalloc/atomics-cstdlib/hwloc/re2/fs-none/lib_pic-none/libchpl.a(chpl-comm.o):(.bss+0x10): multiple definition of
chpl_comm_diags_disable_flag'; /tmp/chpl-nikon-95422.deleteme/CHGLTest.tmp.o:(.bss+0x58): first defined herechpl_comm_diags_counters'; /tmp/chpl-nikon-95422.deleteme/CHGLTest.tmp.o:(.bss+0x0): first defined here
/usr/bin/ld: /home/nikon/projects/chapel-1.20.0/lib/linux64/gnu/x86_64/arch-native/loc-flat/comm-none/tasks-qthreads/tmr-generic/unwind-none/mem-jemalloc/atomics-cstdlib/hwloc/re2/fs-none/lib_pic-none/libchpl.a(chpl-comm-diags.o):(.bss+0xc): multiple definition of
chpl_comm_diags_disable_flag'; /tmp/chpl-nikon-95422.deleteme/CHGLTest.tmp.o:(.bss+0x58): first defined herechpl_comm_diags_counters'; /tmp/chpl-nikon-95422.deleteme/CHGLTest.tmp.o:(.bss+0x0): first defined here
/usr/bin/ld: /home/nikon/projects/chapel-1.20.0/lib/linux64/gnu/x86_64/arch-native/loc-flat/comm-none/tasks-qthreads/tmr-generic/unwind-none/mem-jemalloc/atomics-cstdlib/hwloc/re2/fs-none/lib_pic-none/libchpl.a(chpl-comm-callbacks.o):(.bss+0x0): multiple definition of
chpl_comm_callback_counts'; /home/nikon/projects/chapel-1.20.0/lib/linux64/gnu/x86_64/arch-native/loc-flat/comm-none/tasks-qthreads/tmr-generic/unwind-none/mem-jemalloc/atomics-cstdlib/hwloc/re2/fs-none/lib_pic-none/libchpl.a(comm-none.o):(.bss+0x0): first defined herechpl_task_callback_counts'; /home/nikon/projects/chapel-1.20.0/lib/linux64/gnu/x86_64/arch-native/loc-flat/comm-none/tasks-qthreads/tmr-generic/unwind-none/mem-jemalloc/atomics-cstdlib/hwloc/re2/fs-none/lib_pic-none/libchpl.a(tasks-qthreads.o):(.bss+0x18): first defined here
collect2: error: ld returned 1 exit status
make: *** [/home/nikon/projects/chapel-1.20.0/runtime/etc/Makefile.exe:30: /tmp/chpl-nikon-95422.deleteme/CHGLTest.tmp] Error 1
error: compiling generated source