DMR annotation: gene and cpg islands

pocession / aging_BalbC

Understanding how gut microbiome affect aging intestines through modulating methylation levels. This project is still ongoing. This repository is the code base for analysis.

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DMR annotation: gene and cpg islands #35

Closed pocession closed 4 months ago

pocession commented 4 months ago

[x] Add an argument so that users can choose which type of annotation should be added.
[x] Annotate the CpG and basic genes separately.
[x] Annotate samples with mm10 (Not hg38).