poissonconsulting / mcmcr

An R package to manipulate MCMC samples
https://poissonconsulting.github.io/mcmcr/
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rank-based convergence metrics #26

Open bob-carpenter opened 5 years ago

bob-carpenter commented 5 years ago

Feature Request

Add rank-based version of R-hat for robust trunk and tail convergence diagnostics.

Motivation

Converting numerical values to ranks leads to a more robust R-hat, particularly for heavy-tailed distributions. Furthermore, Aki figured out how to evaluate convergence of tail quantiles, as well. We've converted to this analysis as default output for RStan 2.19, which was just released a few days ago. We haven't eliminated the ability to return the old mean-based metrics.

Reference

joethorley commented 5 years ago

@bob-carpenter Thanks for the interest - will do when I get a chance later in the summer