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poldracklab / pydeface

defacing utility for MRI images
MIT License
110 stars 42 forks source link

shutil has no attribute 'which' #28

Closed pjkohler closed 5 years ago

pjkohler commented 5 years ago

I get the error below when I try to run pydeface. It looks like it is grabbing shutil from my python 2.7 environment, which does not have the "which". It does so even if I run pydeface from my python 3.7 environment. Thanks.

Traceback (most recent call last):

File "/Users/kohler/anaconda2/bin/pydeface", line 11, in load_entry_point('pydeface==2.0', 'console_scripts', 'pydeface')() File "/Users/kohler/code/git/pydeface/pydeface/main.py", line 116, in main pdu.deface_image(**vars(args)) File "/Users/kohler/code/git/pydeface/pydeface/utils.py", line 83, in deface_image if shutil.which('fsl') is None: AttributeError: 'module' object has no attribute 'which'

pjkohler commented 5 years ago

Never mind, I installed while in the 2.7 environment, which gave rise to the error. Thanks.