Closed velpegor closed 1 year ago
Hi @velpegor , are you planning to use pydeface from your command line? In that case you do not need to edit the initial_checks
functions. Instead, for example. you can do:
pydeface /path/to/T1w.nii.gz --template /path/to/template.nii.gz --facemask /path/to/facemask.nii.gz
Maybe this pull request might also be helpful to explain how the optional parameters are used from the command line interface: https://github.com/poldracklab/pydeface/pull/15
If these were not helpful, please elaborate further on the issue that you are having and tell what you want to accomplish.
No response from OP, closing for now.
I don't know how to set it up. help me