ds001517-mriqc: terminate called after throwing an instance of 'std::bad_alloc'

[jbwexler]

For several subjects in ds001517.

Node: mriqc_wf.funcMRIQC.ICA Working directory: /scratch1/03201/jbwexler/work_dir/mriqc/ds001517_sub-17/mriqc_wf/funcMRIQC/_infile..scratch1..03201..jbwexler..open neuro_derivatives..derivatives..mriqc..ds001517-mriqc..sourcedata..raw..sub-17..func..sub-17_task-pred_run-02_bold.nii.gz/ICA

Node inputs:

ICs = approach = args = bg_image = bg_threshold = compress_report = False cov_weight = dim = dim_est = environ = {'FSLOUTPUTTYPE': 'NIFTI_GZ'} epsilon = epsilonS = in_files = log_power = mask = max_restart = maxit = migp = migpN = migp_factor = migp_shuffle = mix = mm_thresh = no_bet = True no_mask = True no_mm = True non_linearity = num_ICs = out_all = out_dir = out_mean = out_orig = out_pca = out_report = melodic_reportlet.svg out_stats = out_unmix = out_white = output_type = NIFTI_GZ pbsc = rem_cmp = remove_deriv = report = report_maps = report_mask = s_con = s_des = sep_vn = sep_whiten = smode = t_con = t_des = tr_sec = update_mask = var_norm =

Traceback (most recent call last): File "/opt/conda/lib/python3.8/site-packages/mriqc/engine/plugin.py", line 60, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command result = self._interface.run(cwd=outdir) File "/opt/conda/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 419, in run runtime = self._run_interface(runtime) File "/opt/conda/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 814, in _run_interface self.raise_exception(runtime) File "/opt/conda/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 741, in raise_exception raise RuntimeError( RuntimeError: Command: melodic -i /scratch1/03201/jbwexler/work_dir/mriqc/ds001517_sub-17/mriqc_wf/funcMRIQC/_infile..scratch1..03201..jbwexler..openneuro_de rivatives..derivatives..mriqc..ds001517-mriqc..sourcedata..raw..sub-17..func..sub-17_task-pred_run-02_bold.nii.gz/sanitize/sub-17_task-p red_run-02_bold_valid.nii.gz --nobet --nomask --no_mm -o /scratch1/03201/jbwexler/work_dir/mriqc/ds001517_sub-17/mriqc_wf/funcMRIQC/in file_..scratch1..03201..jbwexler..openneuro_derivatives..derivatives..mriqc..ds001517-mriqc..sourcedata..raw..sub-17..func..sub-17_task- pred_run-02_bold.nii.gz/ICA Standard output:

Standard error: terminate called after throwing an instance of 'std::bad_alloc' what(): std::bad_alloc Aborted Return code: 134