search

poldracklab / tacc-openneuro

0 stars 1 forks source link

ds003233-mriqc: Exception raised while executing Node synthstrip #35

Open jbwexler opened 1 year ago

jbwexler commented 1 year ago

Just sub-s110.

Node: mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip Working directory: /scratch1/03201/jbwexler/work_dir/mriqc/ds003233_sub-s110/mriqc_wf/anatMRIQC/synthstrip_wf/_infile..scratch1..03201..jbwexler..openneuro_derivatives..derivatives..mriqc..ds003233-mriqc..sourcedata..raw..sub-s110..ses-wk5..anat..sub-s110_ses-wk5_T1w.nii.gz/synthstrip

Node inputs:

args = border_mm = 1 environ = {} in_file = model = /opt/freesurfer/models/synthstrip.1.pt out_file = out_mask = use_gpu = False

Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/mriqc/engine/plugin.py", line 60, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 524, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 642, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 750, in _run_command raise NodeExecutionError( nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node synthstrip.

RuntimeError: subprocess exited with code 1.