poldracklab / tacc-openneuro

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ds002422: Exception raised while executing Node ICA #37

Open jbwexler opened 1 year ago

jbwexler commented 1 year ago

Several subjects in this dataset prouced ICA-related errors.

Node: mriqc_wf.funcMRIQC.ICA Working directory: /scratch1/03201/jbwexler/work_dir/mriqc/ds002242_sub-3023/mriqc_wf/funcMRIQC/_infile..scratch1..03201..jbwexler..openneuro_derivatives..derivatives..mriqc..ds002242-mriqc..sourcedata..raw..sub-3023..func..sub-3023_task-stt_run-1_bold.nii.gz/ICA

Node inputs:

ICs = approach = args = bg_image = bg_threshold = compress_report = False cov_weight = dim = dim_est = environ = {'FSLOUTPUTTYPE': 'NIFTI_GZ'} epsilon = epsilonS = in_files = log_power = mask = max_restart = maxit = migp = migpN = migp_factor = migp_shuffle = mix = mm_thresh = no_bet = True no_mask = True no_mm = True non_linearity = num_ICs = out_all = out_dir = out_mean = out_orig = out_pca = out_report = melodic_reportlet.svg out_stats = out_unmix = out_white = output_type = NIFTI_GZ pbsc = rem_cmp = remove_deriv = report = report_maps = report_mask = s_con = s_des = sep_vn = sep_whiten = smode = t_con = t_des = tr_sec = update_mask = var_norm =

Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/mriqc/engine/plugin.py", line 60, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 524, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 642, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 750, in _run_command raise NodeExecutionError( nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ICA.

RuntimeError: subprocess exited with code 134.

jbwexler commented 1 year ago

Same error for several subjects in ds001926-mriqc.

jbwexler commented 1 year ago

For several subjects in ds003701-mriqc too.