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ds003216-mriqc: "HTTPSConnectionPool(host='mriqc.nimh.nih.gov', port=443): Read timed out." #88

Open jbwexler opened 2 months ago

jbwexler commented 2 months ago

Both subjects failed:

01,02
The following subjects dirs do not exist:
01,03
The following subjects have not been run:
          File "/opt/conda/lib/python3.11/site-packages/urllib3/util/retry.py", line 470, in increment
            raise reraise(type(error), error, _stacktrace)
                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
          File "/opt/conda/lib/python3.11/site-packages/urllib3/util/util.py", line 39, in reraise
            raise value
          File "/opt/conda/lib/python3.11/site-packages/urllib3/connectionpool.py", line 793, in urlopen
            response = self._make_request(
                       ^^^^^^^^^^^^^^^^^^^
          File "/opt/conda/lib/python3.11/site-packages/urllib3/connectionpool.py", line 539, in _make_request
            self._raise_timeout(err=e, url=url, timeout_value=read_timeout)
          File "/opt/conda/lib/python3.11/site-packages/urllib3/connectionpool.py", line 370, in _raise_timeout
            raise ReadTimeoutError(
        urllib3.exceptions.ReadTimeoutError: HTTPSConnectionPool(host='mriqc.nimh.nih.gov', port=443): Read timed out. (read timeout=15)

        During handling of the above exception, another exception occurred:

        Traceback (most recent call last):
          File "/opt/conda/lib/python3.11/site-packages/nipype/interfaces/base/core.py", line 397, in run
            runtime = self._run_interface(runtime)
                      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
          File "/opt/conda/lib/python3.11/site-packages/mriqc/interfaces/webapi.py", line 148, in _run_interface
            response, payload = upload_qc_metrics(
                                ^^^^^^^^^^^^^^^^^^
          File "/opt/conda/lib/python3.11/site-packages/mriqc/interfaces/webapi.py", line 272, in upload_qc_metrics
            response = requests.post(
                       ^^^^^^^^^^^^^^
          File "/opt/conda/lib/python3.11/site-packages/requests/api.py", line 115, in post
            return request("post", url, data=data, json=json, **kwargs)
                   ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
          File "/opt/conda/lib/python3.11/site-packages/requests/api.py", line 59, in request
            return session.request(method=method, url=url, **kwargs)
                   ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
          File "/opt/conda/lib/python3.11/site-packages/requests/sessions.py", line 589, in request
            resp = self.send(prep, **send_kwargs)
                   ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
          File "/opt/conda/lib/python3.11/site-packages/requests/sessions.py", line 703, in send
            r = adapter.send(request, **kwargs)
                ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
          File "/opt/conda/lib/python3.11/site-packages/requests/adapters.py", line 532, in send
            raise ReadTimeout(e, request=request)
        requests.exceptions.ReadTimeout: HTTPSConnectionPool(host='mriqc.nimh.nih.gov', port=443): Read timed out. (read timeout=15)