test tool error - Githubissues

pombase-admin commented 12 years ago

from http://curation.pombase.org/t/2 when you enter curation session v

DBIx::Class::Storage::DBI::dbh(): DBI Connection failed: DBI connect('dbname=pombase-build-2012-03-13-v2-l3;host=oliver0','kmr44',...) failed: FATAL: database "pombase-build-2012-03-13-v2-l3" does not exist at /usr/share/perl5/DBIx/Class/Storage/DBI.pm line 1176. Stack: [/usr/share/perl/5.10/Carp.pm:100] [/usr/local/lib/perl/5.10.1/DBI.pm:672] [/usr/local/lib/perl/5.10.1/DBI.pm:728] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:1176] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:981] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:934] [lib/PomCur/DB.pm:85] [lib/PomCur/Chado/ChadoLookup.pm:56] [reader PomCur::Chado::OntologyAnnotationLookup::schema (defined at lib/PomCur/Chado/ChadoLookup.pm line 46):7] [lib/PomCur/Chado/OntologyAnnotationLookup.pm:162] [lib/PomCur/Curs/Utils.pm:483] [lib/PomCur/Curs/Utils.pm:587] [/var/pomcur/apps/test/root/curs/current_annotation_view.mhtml:48] [/var/pomcur/apps/test/root/curs/front.mhtml:40] [/var/pomcur/apps/test/root/curs/autohandler:20] [/var/pomcur/apps/test/root/curs/page_template.mhtml:81] Stack: [/usr/share/perl5/Carp/Clan.pm:225] [/usr/share/perl5/DBIx/Class/Exception.pm:59] [/usr/local/share/perl/5.10.1/Try/Tiny.pm:76] [/usr/share/perl5/DBIx/Class/Exception.pm:58] [/usr/share/perl5/DBIx/Class/Schema.pm:1037] [/usr/share/perl5/DBIx/Class/Storage.pm:125] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:1207] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:981] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:934] [lib/PomCur/DB.pm:85] [lib/PomCur/Chado/ChadoLookup.pm:56] [reader PomCur::Chado::OntologyAnnotationLookup::schema (defined at lib/PomCur/Chado/ChadoLookup.pm line 46):7] [lib/PomCur/Chado/OntologyAnnotationLookup.pm:162] [lib/PomCur/Curs/Utils.pm:483] [lib/PomCur/Curs/Utils.pm:587] [/var/pomcur/apps/test/root/curs/current_annotation_view.mhtml:48] [/var/pomcur/apps/test/root/curs/front.mhtml:40] [/var/pomcur/apps/test/root/curs/autohandler:20] [/var/pomcur/apps/test/root/curs/page_template.mhtml:81]

Original comment by: ValWood

pombase-admin commented 12 years ago

Sorry, configuration error. Fixed now.

Original comment by: kimrutherford

pombase-admin commented 12 years ago

assigned_to: nobody --> kim_rutherford
status: open --> closed-fixed

Original comment by: kimrutherford

pombase / canto

test tool error #274