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pombase / canto

The PomBase community curation tool
https://curation.pombase.org
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demo session throwing a wobbly #464

Closed pombase-admin closed 9 years ago

pombase-admin commented 11 years ago

http://curation.pombase.org/demo/curs/58cb3afc358c83e6

DBIx::Class::Storage::DBI::dbh(): DBI Connection failed: DBI connect('dbname=pombase-build-2012-06-13-v2-l5;host=oliver0','kmr44',...) failed: FATAL: database "pombase-build-2012-06-13-v2-l5" does not exist at /usr/share/perl5/DBIx/Class/Storage/DBI.pm line 1176. Stack: [/usr/share/perl/5.10/Carp.pm:100] [/usr/local/lib/perl/5.10.1/DBI.pm:672] [/usr/local/lib/perl/5.10.1/DBI.pm:728] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:1176] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:981] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:934] [lib/PomCur/DB.pm:85] [lib/PomCur/Chado/ChadoLookup.pm:56] [reader PomCur::Chado::OntologyAnnotationLookup::schema (defined at lib/PomCur/Chado/ChadoLookup.pm line 46):7] [lib/PomCur/Chado/OntologyAnnotationLookup.pm:202] [lib/PomCur/Curs/Utils.pm:495] [lib/PomCur/Curs/Utils.pm:599] [/var/pomcur/apps/demo/root/curs/current_annotation_view.mhtml:48] [/var/pomcur/apps/demo/root/curs/front.mhtml:40] [/var/pomcur/apps/demo/root/curs/autohandler:23] [/var/pomcur/apps/demo/root/curs/page_template.mhtml:82] Stack: [/usr/share/perl5/Carp/Clan.pm:225] [/usr/share/perl5/DBIx/Class/Exception.pm:59] [/usr/local/share/perl/5.10.1/Try/Tiny.pm:76] [/usr/share/perl5/DBIx/Class/Exception.pm:58] [/usr/share/perl5/DBIx/Class/Schema.pm:1037] [/usr/share/perl5/DBIx/Class/Storage.pm:125] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:1207] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:981] [/usr/share/perl5/DBIx/Class/Storage/DBI.pm:934] [lib/PomCur/DB.pm:85] [lib/PomCur/Chado/ChadoLookup.pm:56] [reader PomCur::Chado::OntologyAnnotationLookup::schema (defined at lib/PomCur/Chado/ChadoLookup.pm line 46):7] [lib/PomCur/Chado/OntologyAnnotationLookup.pm:202] [lib/PomCur/Curs/Utils.pm:495] [lib/PomCur/Curs/Utils.pm:599] [/var/pomcur/apps/demo/root/curs/current_annotation_view.mhtml:48] [/var/pomcur/apps/demo/root/curs/front.mhtml:40] [/var/pomcur/apps/demo/root/curs/autohandler:23] [/var/pomcur/apps/demo/root/curs/page_template.mhtml:82]

was after the confirm genes step (1 gene uploaded) http://curation.pombase.org/demo/curs/58cb3afc358c83e6/confirm_genes

val

Original comment by: ValWood

pombase-admin commented 11 years ago

Original comment by: kimrutherford

pombase-admin commented 11 years ago

This should be fixed now.

Original comment by: kimrutherford