Closed pombase-admin closed 8 years ago
Also on my todo list. Need to see if we can extend any of the fungal-specific families. More interesting if conserved to vertbrates. Speak to Jurg about this, might be a student project for UCl as will impact his "unknowns". Also looking for S. cerevisiae orthologs for those which only hit a few fungi.
Original comment by: ValWood
transferred to https://github.com/pombase/curation/issues/810
Yeah, there are quite a lot of proteins, which when I did this, were only present in pombe (but no other fungi) and metazoa, like this one:
http://www.pombase.org/spombe/result/SPBC26H8.13c http://www.ebi.ac.uk/interpro/entry/IPR022773/taxonomy
and this one http://www.pombase.org/spombe/result/SPCC18.17c
So there really was no broad fungal conservation. Now there are japonicus and octospous for many.
Others I need to fix.....
Original comment by: ValWood