Datasets suitable for tracks

Antonialock commented 7 years ago

Chromatin binding

sir2, clr3: PMID:16079916
pho7 PMID:23231582 GSE39499

RNA expression

copper, iron: PMID:17477863
copper iron phosphate PMID:23231582 GSE39499
hydrogen peroxide, menadione, tbh: PMID:18003976, E-MEXP-1083
cell cycle: E-MEXP-54 PMID:15195092
nitric oxide GSE67272 PMID:26645666

Histone modifications

https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-11511/samples/?keywords=histone+methylation&organism=Schizosaccharomyces+pombe&exptype%5B%5D=&exptype%5B%5D=&array=&s_page=2&s_pagesize=25

Antonialock commented 6 years ago

all WT features for tracks or external references for some? @ValWood

ValWood commented 6 years ago

I think the vague plan is for all WT features to be tracks if appropriate... I guess some may not be high priority to host though. We should prioritise datasets that we know will be popular first...

ValWood commented 4 years ago

Should this be on the website tracker, or is it covered?

ValWood commented 4 years ago

Not sure we need this ticket. If we have datasets we need to host with high priority will open a tracker ticket. Otherwise, there are plenty in the "datasets to host" portion of the curation tool

pombase / curation

Datasets suitable for tracks #1327