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pombase / curation

PomBase curation
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Figure 1C? [2C?] #1831

Closed ValWood closed 6 years ago

ValWood commented 6 years ago

Mock up. I will update the pombe and the cerevisiae data. Antonia will prepare human data and the figure

slimming summary

Antonialock commented 6 years ago

slim20180328.txt

ValWood commented 6 years ago

I'm confused. I used the slim terms you provided, then when double checking human the following don't slim?

keratinization 163 skin development 169 tissue development 253 immunoglobulin production 45 spermatogenesis 91 C-terminal protein lipidation 24 cilium movement 21 fertilization 34

ValWood commented 6 years ago

please just send me the list of IDs that you added to my list.....that is all I need, nothing else.

ValWood commented 6 years ago

In a file plain text....no control characters or anything.....

Antonialock commented 6 years ago

see the text file above? It's plain text Val. I don't understand what your problem is. Just copy and paste the IDs into the tool.

GO:0032502 developmental process is in my list so that catches e.g. keratinization GO:0003341 cilium movement is also in my list..

ValWood commented 6 years ago

Please just send me the terms you added. I don't know what the problem is but when I paste your list into my list it doesn't work.

I only want the terms you added.

ValWood commented 6 years ago

I don't know why...

files

Antonialock commented 6 years ago

I emailed you

ValWood commented 6 years ago

Your list is pretty damn good ! We are on the same page with what to include/exclude. Most of the stuff that isn't mapped is non-specific.

I enriched the "drop out" and I think we should add a few terms, but I'll open a new ticket for outstanding tasks and close this one....