Closed pombase-admin closed 9 years ago
I've put a transposon FAQ on dev -- let me know if it needs any edits before I copy it over to www.
http://dev.pombase.org/faqs/how-can-i-find-transposons-s-pombe-genome
I haven't done one for contigs in Artemis because I don't know what you want it to say. I've only got this so far (for the answer; don't even have wording for the Q):
Download and install Artemis from http://www.sanger.ac.uk/resources/software/artemis/
Read in the EMBL format files of sequence and annotation; these are available from ftp://ftp.sanger.ac.uk/pub/yeast/pombe/Chromosome_contigs (there is also a link on the DNA Datasets page).
Original comment by: mah11
Looks good,
I did the text tweaks and fixed the psudoes so they are just represented as frameshifted CDS.
Will get around the LTRs at some point.....
Original comment by: ValWood
ok, on www
Original comment by: mah11
Original comment by: ValWood
In this RT item...
accessing LTRs, transposons https://rt.sanger.ac.uk/Ticket/Display.html?id=269629
and an item for viewing contigs in artemis
Original comment by: ValWood