This file has GO_REF:0000036 for all its entries, but that reference can only be used when there's more than one "inferred from" GO ID to put in the with/from column.
If the "from" terms (GO:0019783, GO:0019787, etc.) all have sequence similarity evidence (ISS, ISO, ISM, etc), the IC'd annotations can use GO_REF:0000111.
This file has GO_REF:0000036 for all its entries, but that reference can only be used when there's more than one "inferred from" GO ID to put in the with/from column.
If the "from" terms (GO:0019783, GO:0019787, etc.) all have sequence similarity evidence (ISS, ISO, ISM, etc), the IC'd annotations can use GO_REF:0000111.