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PomBase curation
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Pathway annotations from contigs #3650

Open kimrutherford opened 7 months ago

kimrutherford commented 7 months ago

From: https://github.com/pombase/website/issues/2142#issuecomment-1946736885

 gene_uniquename |     pmid      | annotation_date |    source_file     
-----------------+---------------+-----------------+--------------------
 SPAC110.03      | null          | 2008-07-18      | chromosome1.contig
 SPAC12G12.13c   | PMID:16478992 | 2006-04-20      | chromosome1.contig
 SPAC16E8.09     | null          |                 | chromosome1.contig
 SPAC1705.03c    | PMID:20032302 | 2010-06-24      | chromosome1.contig
 SPAC17A2.13c    | PMID:12242289 |                 | chromosome1.contig
 SPAC17H9.09c    | null          | 2008-07-18      | chromosome1.contig
 SPAC1F3.02c     | PMID:10365961 |                 | chromosome1.contig
 SPAC1F5.09c     | null          |                 | chromosome1.contig
 SPAC21E11.03c   | PMID:15448137 | 2009-01-04      | chromosome1.contig
 SPAC22H10.07    | null          | 2008-07-18      | chromosome1.contig
 SPAC23H3.08c    | null          |                 | chromosome1.contig
 SPAC6B12.15     | PMID:11263963 | 2006-05-03      | chromosome1.contig
 SPAC8E11.02c    | PMID:12242289 |                 | chromosome1.contig
 SPAC926.04c     | PMID:18430926 | 2009-12-15      | chromosome1.contig
 SPBC106.01      | null          |                 | chromosome2.contig
 SPBC106.10      | null          | 2009-12-15      | chromosome2.contig
 SPBC119.08      | PMID:8943330  |                 | chromosome2.contig
 SPBC119.08      | PMID:10365961 |                 | chromosome2.contig
 SPBC1604.14c    | PMID:7597098  |                 | chromosome2.contig
 SPBC20F10.06    | null          |                 | chromosome2.contig
 SPBC21.05c      | null          | 2008-07-18      | chromosome2.contig
 SPBC29B5.01     | PMID:15448137 | 2009-01-04      | chromosome2.contig
 SPBC336.03      | PMID:12052869 |                 | chromosome2.contig
 SPBC543.07      | PMID:10591634 |                 | chromosome2.contig
 SPCC16C4.09     | PMID:8886983  |                 | chromosome3.contig
 SPCC1795.01c    | null          |                 | chromosome3.contig
 SPCC285.09c     | PMID:15448137 | 2009-01-04      | chromosome3.contig
(27 rows)
ValWood commented 2 months ago

remove from contigs