pombase / curation

PomBase curation
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Duplicate gene name trm6 #3658

Closed kimrutherford closed 4 months ago

kimrutherford commented 4 months ago

Hi Val.

The load failed because of a duplicate gene name, trm6:

chromosome1.contig-FT   CDS             1993930..1995024
chromosome1.contig-FT                   /synonym="cpd1"
chromosome1.contig:FT                   /primary_name="trm6"
chromosome1.contig-FT                   /product="tRNA (m1A) methyltransferase complex catalytic                                                        
chromosome1.contig-FT                   subunit Trm6"
chromosome1.contig-FT                   /systematic_id="SPAC9G1.12"
chromosome2.contig-FT   CDS             join(265374..265468,265605..266898)
chromosome2.contig-FT                   /synonym="gcd10"
chromosome2.contig:FT                   /primary_name="trm6"
chromosome2.contig-FT                   /product="tRNA (m1A) methyltransferase non-catalytic                                                            
chromosome2.contig-FT                   subunit Trm6"
chromosome2.contig-FT                   /systematic_id="SPBC800.08"

It least it confirmed that pombase/pombase-chado#1144 works.

ValWood commented 4 months ago

oh dear, i fixed it. I also got trm6./trm61 mixed up in the session so I'll need to fix all the curation.

kimrutherford commented 4 months ago

Thanks, the load worked.