Allele with description in the name: alp7-5A(S50A,S51A,T100A,T116A,T131A)

[kimrutherford]

Hi Val.

It looks like this allele has the description included in the name.

https://www.pombase.org/genotype/alp7-5A%28S50A,S51A,T100A,T116A,T131A%29-S50A,S51A,T100A,T116A,T131A-amino_acid_mutation-expression-not_assayed_or_wild_type

https://curation.pombase.org/pombe/curs/f134593392c70d97/genotype_manage/ro

I saw this when checking the allele comments load log file: https://curation.pombase.org/dumps/builds/pombase-build-2024-02-26/logs/log.2024-02-25-22-16-33.allele-comments-from-supporting-data

[ValWood]

Yes it's a bit clunky but it's to differentiate:

allele_comments.txt:alp7-5A(S50A,S51A,T100A,T116A,T131A) warning: same name as alp7-5A(K341,Y344,R346,K347,Y348) PMID:29021344 allele_comments.txt:alp7-5A(K341,Y344,R346,K347,Y348) warning: same name as alp7-5A(S50A, S51A, T100A, T116A, T131A) PMID:24790093

maybe I should change them to alp7-5A(a) and alp7-5A(b) would be less confusing?

[kimrutherford]

allele_comments.txt:alp7-5A(K341,Y344,R346,K347,Y348) warning: same name as alp7-5A(S50A, S51A, T100A, T116A, T131A) PMID:24790093

alp7-5A(K341,Y344,R346,K347,Y348) isn't in Chado so there's a warning at the moment: https://curation.pombase.org/dumps/builds/pombase-build-2024-02-26/logs/log.2024-02-25-22-16-33.allele-comments-from-supporting-data

maybe I should change them to alp7-5A(a) and alp7-5A(b) would be less confusing?

I'd prefer that. :-) But if you're happy we the current alleles names, it looks OK in the website. I only flagged it in case it was an error.

[ValWood]

fixed as discussed