tRNA embedded in a lncRNA

[kimrutherford]

From: https://github.com/pombase/website/issues/2187#issuecomment-2196253287

---

Most of them don't look useful but there are some that fold sensibly: https://rnacentral.org/rna/URS000230DC2B/4896 https://www.pombase.org/gene/SPNCRNA.6405

blimey that's a tRNA embedded in a lncRNA, I will take a look at that!

---

blimey that's a tRNA embedded in a lncRNA, I will take a look at that!

There are a bunch of other lncRNA genes that look similar:

SPNCRNA.7042 - https://rnacentral.org/rna/URS000230D4B2/4896 SPNCRNA.7125 - https://rnacentral.org/rna/URS000230D734/4896 SPNCRNA.7383 - https://rnacentral.org/rna/URS000230DD31/4896 SPNCRNA.7463 - https://rnacentral.org/rna/URS000230DE76/4896 SPNCRNA.2529 - https://rnacentral.org/rna/URS000230DC70/4896 SPNCRNA.1669 - https://rnacentral.org/rna/URS000019CED9/4896 SPNCRNA.2479 - https://rnacentral.org/rna/URS000230D749/4896 SPNCRNA.2656 - https://rnacentral.org/rna/URS000230D399/4896 SPNCRNA.2777 - https://rnacentral.org/rna/URS000230DE13/4896 SPNCRNA.2990 - https://rnacentral.org/rna/URS000230E2E9/4896 SPNCRNA.3131 - https://rnacentral.org/rna/URS000230DDBA/4896 SPNCRNA.4841 - https://rnacentral.org/rna/URS000230D36A/4896

And one that RNAcentral lists as 5S ribosomal RNA: SPNCRNA.4731 - https://rnacentral.org/rna/URS000230E3F3/4896