pombase-admin
commented
13 years ago got rid of anohter wedge including:
2 | specifically 1 | mitotic 1 | ubiquitinated_by 1 | meiotic 1 | copper_dependent 1 | establishment 1 | Mbf_targets 1 | recruitment_to_specific_genes 1 | inhibited_by 1 | SF 2915469 priming 1 | during_checkpoint_activation 1 | false_positive 1 | increased
will ask Kim to re run after next dataset
Original comment by: ValWood
This is the current list of qualfiers used Some are specific for certain annotation types. Still need to change some of the remaining ones to annotation_extension.....
5717 | deletion 695 | predicted 479 | fitness_profiling 283 | contributes_to 243 | required 209 | heterologous_system 205 | localization_dependency 96 | overexpression 84 | same_pathway 63 | ts 53 | region 51 | different_pathway 46 | colocalizes_with 44 | dosage_rescue 34 | cancer_census 29 | C_term 28 | N_term 25 | transcriptionally_regulates 25 | low_penetrance 23 | predominantly 21 | redundant_with 18 | acts_upstream_of 18 | repressed_by 17 | acts_downstream_of 16 | activates 16 | synthetic_lethality 14 | constitutive 11 | two_hybrid 11 | synthetic_rescue 10 | in_vitro 10 | partially_redundant 9 | sterol_dependent 8 | phenotypic_suppression 8 | major 7 | phenotypic_enhancement 7 | conditional 6 | minor 6 | synthetic_growth_defect 5 | high_penetrance 5 | inhibits 4 | during_vegetative_growth 4 | during_nutrient_limitation 4 | antagonistic_interaction 3 | during_stationary_phase 3 | weak 3 | in_minimal_media 3 | at_high_temperature 3 | dephosphorylates 3 | triple_mutant 3 | indirect 2 | false_negative 2 | inferred_from_context 2 | during_early_sporulation 2 | at_low_temperature 2 | double_mutant 2 | in_presence_of_TBC 2 | diploid 2 | specifically 1 | mitotic 1 | ubiquitinated_by 1 | meiotic 1 | copper_dependent 1 | establishment 1 | Mbf_targets 1 | caffeine_mediated_override 1 | recruitment_to_specific_genes 1 | inhibited_by 1 | inactivated_by 1 | SF 2915469 priming 1 | during_checkpoint_activation 1 | false_positive 1 | increased (72 rows)
Original comment by: ValWood