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pombase / fypo

Fission Yeast Phenotype Ontology
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PMID:15116432 #1926

Closed fypoadmin closed 9 years ago

fypoadmin commented 9 years ago
  1. inviable after spore germination, without cell division, abnormal septum formation
  2. inviable after spore germination, without cell division, abnormal septum formation, enlarged nucleus
  3. inviable after spore germination, without cell division, abnormal cell shape (cell bulges out around the the nucleus+ is elongated...it doesn't look like lemon I think but that could be because they are long? fig1c)
  4. inviable after spore germination, without cell division, normal septum morphology
  5. inviable after spore germination, multiple cell divisions, normal septum morphology
  6. inviable after spore germination, multiple cell divisions, elongated multinucleate with abnormal septum formation
  7. inviable after spore germination, multiple cell divisions, elongated, aseptate cell (is this the arrest in interphase)
  8. inviable after spore germination, multiple cell divisions, small cell with abnormal septum morphology
  9. normal protein import into nucleus (contains NLS target seq)
  10. cut during cellular response to thiabendazole

Original comment by: Antonialock

fypoadmin commented 9 years ago

Original comment by: mah11

fypoadmin commented 9 years ago

new terms inviable after spore germination, without cell division, abnormal septum morphology FYPO:0004114 inviable after spore germination, without cell division, abnormal septum morphology, enlarged nucleus FYPO:0004115 inviable after spore germination, without cell division, cell enlarged around nucleus FYPO:0004116 inviable after spore germination, without cell division, normal septum morphology FYPO:0004117 inviable after spore germination, multiple cell divisions, normal septum morphology FYPO:0004118 inviable after spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology formation FYPO:0004119 inviable after spore germination, multiple cell divisions, small cell with abnormal septum morphology FYPO:0004120 normal protein import into nucleus FYPO:0004121 cut during cellular response to thiabendazole FYPO:0004122

Added a synonym to FYPO:0003529 for #7.

I did "septum morphology" in all the term names, and gave 'em "septum formation" synonyms.

I definitely wouldn't use "lemon-shaped" for #3 -- lemon-shaped cells really are lemony, like PMID:8522609 fig. 2e.

Original comment by: mah11