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Fission Yeast Phenotype Ontology
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FYECO terms for Phenomics paper #4210

Open manulera opened 1 year ago

manulera commented 1 year ago

[Term]
id: FYECO:0000407
name: + benzamidine
def: "An experimental condition in which benzamidine was added to the medium or assay buffer in excess 
compared to standard medium or assay buffers." [PomBase:mlr]
synonym: "benzamidine added" EXACT [PomBase:mlr]
is_a: FYECO:0000109 ! grouping excess
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000408
name: + canavanin
def: "An experimental condition in which canavanin was added to the medium or assay buffer in excess co
mpared to standard medium or assay buffers." [PomBase:mlr]
synonym: "canavanin added" EXACT [PomBase:mlr]
is_a: FYECO:0000109 ! grouping excess
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000409
name: + 2,2'-dipyridyl
def: "An experimental condition in which 2,2'-dipyridyl was added to the medium or assay buffer in exce
ss compared to standard medium or assay buffers." [PomBase:mlr]
synonym: "2,2'-dipyridyl added" EXACT [PomBase:mlr]
is_a: FYECO:0000109 ! grouping excess
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000410
name: + 3,4-dihydrocoumarin
def: "An experimental condition in which 3,4-dihydrocoumarin was added to the medium or assay buffer in
 excess compared to standard medium or assay buffers." [PomBase:mlr]
synonym: "3,4-dihydrocoumarin added" EXACT [PomBase:mlr]
is_a: FYECO:0000109 ! grouping excess
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000411
name: + egtazic acid
def: "An experimental condition in which egtazic acid was added to the medium or assay buffer in excess
 compared to standard medium or assay buffers." [PomBase:mlr]
synonym: "egtazic acid added" EXACT [PomBase:mlr]
synonym: "EGTA added" EXACT [PomBase:mlr]
synonym: "+ EGTA" EXACT [PomBase:mlr]
is_a: FYECO:0000109 ! grouping excess
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000412
name: + tunicamycin
def: "An experimental condition in which tunicamycin was added to the medium or assay buffer in excess 
compared to standard medium or assay buffers." [PomBase:mlr]
synonym: "tunicamycin added" EXACT [PomBase:mlr]
is_a: FYECO:0000109 ! grouping excess
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000413
name: + valproic acid
def: "An experimental condition in which valproic acid was added to the medium or assay buffer in exces
s compared to standard medium or assay buffers." [PomBase:mlr]
synonym: "valproic acid added" EXACT [PomBase:mlr]
is_a: FYECO:0000109 ! grouping excess
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000414
name: xylose YE
def: "Experiments were performed in rich medium containing xylose as the carbon source, yeast extract a
nd other components. The concentration of xylose is typically around 2%." [PomBase:mlr]
comment: Use the medium terms to specify the general type of growth medium and its carbon source. If ce
rtain chemicals not normally found in the medium were added, please also use the 'chemical added/exclude
d' terms, for instance 'caffeine added' or 'nitrogen excluded'. If a chemical was added in a much lower 
quantity than normal, please use the 'limited chemical added' conditions, for instance 'limited adenine 
added'.
synonym: "xylose rich medium" BROAD [PomBase:mlr]
is_a: FYECO:0000080 ! grouping rich medium
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000415
name: + tea tree oil
def: "An experimental condition in which tea tree oil was added to the medium or assay buffer in excess
 compared to standard medium or assay buffers." [PomBase:mlr]
synonym: "tea tree oil added" EXACT [PomBase:mlr]
is_a: FYECO:0000109 ! grouping excess
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000416
name: glucose MM, cysteine nitrogen source
def: "Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and wit
h L-glutamatic acid as the nitrogen source." [https://www.sunrisescience.com/pages/ystmedia_sp_emm.html,
 PomBase:mlr]
synonym: "glucose minimal medium, cysteine nitrogen source" EXACT [PomBase:mlr]
synonym: "standard glucose minimal medium, cysteine nitrogen source" RELATED [PomBase:mlr]
is_a: FYECO:0000013 ! grouping defined medium
created_by: mlr
creation_date: 2022-09-28T14:15:00Z

[Term]
id: FYECO:0000417
name: glucose MM, methionine nitrogen source
def: "Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and wit
h L-glutamatic acid as the nitrogen source." [https://www.sunrisescience.com/pages/ystmedia_sp_emm.html,
 PomBase:mlr]
synonym: "glucose minimal medium, methionine nitrogen source" EXACT [PomBase:mlr]
synonym: "standard glucose minimal medium, methionine nitrogen source" RELATED [PomBase:mlr]
is_a: FYECO:0000013 ! grouping defined medium
created_by: mlr
creation_date: 2022-09-28T14:15:00Z
manulera commented 1 year ago

Addressed in:

d773c49cd03d887b34a1219cc62d1ea8d65cbe20 18e88e919126c98b304540dddbbb8dcce70a23dc 145c1ea203af82e2f6499b37e59cc73cad05dca6