pombase / fypo

Fission Yeast Phenotype Ontology
Creative Commons Attribution 4.0 International
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Issues 4310 4364 #4365

Closed manulera closed 1 year ago

github-actions[bot] commented 1 year ago

Changes added to the edit file this PR

Click to expand # Ontology comparison ## Left - Ontology IRI: `http://purl.obolibrary.org/obo/fypo.owl` - Version IRI: *None* - Loaded from: `file:/__w/fypo/fypo/master/src/ontology/fypo-edit.owl` ## Right - Ontology IRI: `http://purl.obolibrary.org/obo/fypo.owl` - Version IRI: *None* - Loaded from: `file:/__w/fypo/fypo/src/ontology/fypo-edit.owl` ### Ontology imports ### Ontology annotations ### increased protein localization to cell cortex during mitotic interphase `http://purl.obolibrary.org/obo/FYPO_0009061` #### Added - [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) [has_exact_synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "increased protein localisation to cell cortex during mitotic interphase" - [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) [creator](http://purl.org/dc/elements/1.1/creator) "PomBase:mlr"^^[string](http://www.w3.org/2001/XMLSchema#string) - [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "higher protein localization to cell cortex during mitotic interphase" - [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) [label](http://www.w3.org/2000/01/rdf-schema#label) "increased protein localization to cell cortex during mitotic interphase"@en - [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "We recommend noting which protein(s) were used in the assay when annotating to this term." - [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "A cell phenotype observed in mitotic interphase in which the localization of a protein to the cell cortex is increased." - [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) [date](http://purl.org/dc/elements/1.1/date) "2023-06-21T13:38:07Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - Class: [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) - [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) EquivalentTo [has_part](http://purl.obolibrary.org/obo/BFO_0000051) some ([increased occurrence](http://purl.obolibrary.org/obo/PATO_0002051) and ([inheres_in](http://purl.obolibrary.org/obo/RO_0000052) some ([protein localization to cell cortex](http://purl.obolibrary.org/obo/GO_0072697) and ([happens during](http://purl.obolibrary.org/obo/RO_0002092) some [mitotic interphase](http://purl.obolibrary.org/obo/GO_0051329))))) - [increased protein localization to cell cortex during mitotic interphase](http://purl.obolibrary.org/obo/FYPO_0009061) SubClassOf [increased protein localization to cell cortex during vegetative growth](http://purl.obolibrary.org/obo/FYPO_0009059) ### resistance to wortmannin `http://purl.obolibrary.org/obo/FYPO_0009060` #### Added - [resistance to wortmannin](http://purl.obolibrary.org/obo/FYPO_0009060) [has_exact_synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "resistance to wortmannin during vegetative growth" - [resistance to wortmannin](http://purl.obolibrary.org/obo/FYPO_0009060) [label](http://www.w3.org/2000/01/rdf-schema#label) "resistance to wortmannin"@en - [resistance to wortmannin](http://purl.obolibrary.org/obo/FYPO_0009060) [has_exact_synonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "resistant to wortmannin" - [resistance to wortmannin](http://purl.obolibrary.org/obo/FYPO_0009060) [creator](http://purl.org/dc/elements/1.1/creator) "PomBase:mlr"^^[string](http://www.w3.org/2001/XMLSchema#string) - [resistance to wortmannin](http://purl.obolibrary.org/obo/FYPO_0009060) [date](http://purl.org/dc/elements/1.1/date) "2023-06-21T13:31:18Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - [resistance to wortmannin](http://purl.obolibrary.org/obo/FYPO_0009060) [definition](http://purl.obolibrary.org/obo/IAO_0000115) "An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of wortmannin than normal." - [database_cross_reference](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:26891792"^^[string](http://www.w3.org/2001/XMLSchema#string) - Class: [resistance to wortmannin](http://purl.obolibrary.org/obo/FYPO_0009060) - [resistance to wortmannin](http://purl.obolibrary.org/obo/FYPO_0009060) EquivalentTo [has_part](http://purl.obolibrary.org/obo/BFO_0000051) some ([decreased sensitivity of a process](http://purl.obolibrary.org/obo/PATO_0001552) and ([inheres_in](http://purl.obolibrary.org/obo/RO_0000052) some [single-celled organism vegetative growth phase](http://purl.obolibrary.org/obo/GO_0072690)) and ([towards](http://purl.obolibrary.org/obo/RO_0002503) some [wortmannin](http://purl.obolibrary.org/obo/CHEBI_52289))) - [resistance to wortmannin](http://purl.obolibrary.org/obo/FYPO_0009060) SubClassOf [increased resistance to chemical during vegetative growth](http://purl.obolibrary.org/obo/FYPO_0000126)
# Changes to ontology after reasoner runs
Click to expand Coming soon >
# Errors reported ``` Level Rule Name Subject Property Value WARN missing_definition output_of definition WARN missing_definition preceded_by definition WARN missing_definition precedes definition INFO lowercase_definition has_output definition p has output c if either: p has direct output c or p has output input c. Implies that if p happens, c always ensues. INFO missing_superclass phenotype rdfs:subClassOf ```