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pombase / pombase-chado

PomBase code for accessing Chado
MIT License
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Some promoters missing from Chado #1156

Closed kimrutherford closed 8 months ago

kimrutherford commented 8 months ago

While implementing:

I noticed that some promoters aren't being stored.

For example the exogenous promoter nmt81 from ed9652a888c24c94 is not in Chado: https://curation.pombase.org/pombe/curs/ed9652a888c24c94/feature/genotype/view/2/ro

See also: pombase/pombase-chado#1087

Edit: it might be PomBase::Chado::GenotypeCache that's going wrong.

kimrutherford commented 8 months ago

I think I've fixed this.

I'm doing a test load on my desktop now and I'll also check the results of the nightly load before closing.

kimrutherford commented 8 months ago

Seems OK now.

https://www.pombase.org/genotype/mad1%2B%28wild_type%29-expression-overexpression

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