error with allowed CHEBI extension

pombase / pombase-chado

PomBase code for accessing Chado

MIT License

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error with allowed CHEBI extension #248

Closed pombase-admin closed 9 years ago

pombase-admin commented 10 years ago

error in 04c76a23c253368a: DBIx::Class::Schema::txn_do(): can't find term with ID: CHEBI:16811

(Id exists, in fact I think I have seen this on gene pages so I'm sure it has parsed OK?)

Original comment by: ValWood

pombase-admin commented 10 years ago

status: open --> closed-works-for-me

Original comment by: mah11

pombase-admin commented 10 years ago

When it throws one of these warnings, it means we have to add the term to the "mini-chebi" ontology (pombe-embl/mini-ontologies/chebi.obo). I've just done this one, so the warning won't appear in the next load.

(The gene pages get ontology terms from Mark's ensembl db loads.)

Original comment by: mah11