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pombase / pombase-chado

PomBase code for accessing Chado
MIT License
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GO term remapping is failing #432

Closed pombase-admin closed 9 years ago

pombase-admin commented 9 years ago

DBIx::Class::Storage::DBI::ANON(): DBI Exception: DBD::Pg::st execute failed: ERROR: duplicate key value violates unique constraint "feature_cvterm_c1" DETAIL: Key (feature_id, cvterm_id, pub_id, rank)=(103001, 24469, 4173, 0) already exists. [for Statement "UPDATE feature_cvterm SET cvterm_id = (SELECT to_cvterm_id FROM pombase_change_terms_temp_cvterm_ids WHERE cvterm_id = from_cvterm_id) WHERE cvterm_id IN (SELECT from_cvterm_id FROM pombase_change_terms_temp_cvterm_ids) AND feature_cvterm_id NOT IN (SELECT feature_cvterm_id FROM feature_cvtermprop p JOIN cvterm pt on p.type_id = pt.cvterm_id WHERE pt.name = ? )" with ParamValues: 1='canto_session'] at /home/kmr44/git/pombase-chado/lib/PomBase/Chado/ChangeTerms.pm line 235

Original comment by: kimrutherford

pombase-admin commented 9 years ago

Original comment by: kimrutherford