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pombase / website

PomBase website v2
MIT License
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investigate predict protein #2217

Closed ValWood closed 2 months ago

ValWood commented 2 months ago

This tool uses protein embeddings. Referred to in https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9374478/pdf/baac062.pdf https://predictprotein.org/about https://predictprotein.org/

We should evaluate this at some point

PCarme commented 2 months ago

This tool predicts quite a lot of features, so I'm not really sure how to evaluate it. We should probably discuss about the use we would make of it as well.

ValWood commented 2 months ago

I was thinking for additional signal sequences but they have made it just web based at the moment so it's no use to us at the moment.