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PomBase website v2
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Find out how to set up an automated BioCyc using GO MF data #2234

Open ValWood opened 2 months ago

ValWood commented 2 months ago

Find out how to set up an automated BioCyc using GO MF data

ValWood commented 2 months ago

ANd generate a pathway holes report (this will be useful for "unknowns" projects

ValWood commented 1 month ago

This is the most recent paper about the tools https://arxiv.org/abs/1510.03964v3 This 15min tutorial might be useful to watch first to see the capabilities https://www.youtube.com/watch?v=e7f-XluS3aA&feature=youtu.be

ValWood commented 1 month ago

This is the SGD tool using metacyc software https://pathway.yeastgenome.org/ (which is different from the one provided by biocyc)

ValWood commented 1 month ago

Another useful feature of this (although it will only include metabolism, will be a nice feature)

biocyc