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popgenmethods / momi2

Infer demographic history with the Moran model
GNU General Public License v3.0
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Unable to install it #43

Closed huanglei-artificium closed 3 years ago

huanglei-artificium commented 3 years ago

I installed Miniconda3-py37_4.9.2-Linux-x86_64.sh in the virtual machine and ran "conda install -c jackkamm momi" in the terminal. It went like that

(base) lsda@lsdabox:~$ conda install -c jackkamm momi Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source. Collecting package metadata (repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: \ Found conflicts! Looking for incompatible packages. This can take several minutes. Press CTRL-C to abort. failed

UnsatisfiableError: The following specifications were found to be incompatible with each other:

Output in format: Requested package -> Available versions

I didn't do anything else. Maybe it's a problem in the environment settings in miniconda? Currently I don't know why.

jackkamm commented 3 years ago

It looks like the install command is incorrect, it should be:

conda install momi -c conda-forge -c bioconda -c jackkamm

See also: https://momi2.readthedocs.io/en/latest/installation.html

huanglei-artificium commented 3 years ago

image Thanks. Now I could install and run it. But the command I once used is from the picture. (Someone sent me but I don't know where it's from.) Do you think it's correct?

jackkamm commented 3 years ago

It's from https://anaconda.org/jackkamm/momi. However, it's autogenerated by anaconda.org and I don't think there's any way for me to change it. If you find a way to do so, please reopen this issue.