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popgenmethods / pyrho

Fast inference of fine-scale recombination rates based on fused-LASSO
MIT License
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Error while running "make_table" #1

Closed Shabs86 closed 5 years ago

Shabs86 commented 5 years ago

I used the following command to create table: pyrho make_table -n 316 --approx -N 316 -th 0.002 -o 55_trios

But I got the following error: Traceback (most recent call last): File "/home/shabbeerhassan/anaconda2/bin/pyrho", line 11, in load_entry_point('pyrho==0.0.1', 'console_scripts', 'pyrho')() File "/home/shabbeerhassan/anaconda2/lib/python2.7/site-packages/pyrho/frontend.py", line 67, in main func(args) File "/home/shabbeerhassan/anaconda2/lib/python2.7/site-packages/pyrho/make_table.py", line 82, in _main load_stationary=args.load_stationary).table TypeError: init() got an unexpected keyword argument 'store_stationary'

jeffspence commented 5 years ago

Thanks for catching this! Should be fixed with commit https://github.com/popgenmethods/ldpop/commit/182d6b33180b3ca3625fbed6df7ca5a9d849c5ad to ldpop.