popgenmethods / smcpp

SMC++ infers population history from whole-genome sequence data.
GNU General Public License v3.0
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smc++ simulate function #233

Open chongjing opened 1 year ago

chongjing commented 1 year ago

Hi @terhorst , I am trying to use smc++ simulate function to simulate a small population based on the model inferred from smc++ estimate. The version is SMC++ v1.15.5, command smc++ simulate --contig_id Chr1 group.final.json 6 1000000 group.sim1.1mb.vcf. It has been running over 48hrs, no any results, no any messages produced. I wonder, is this smc++ simulate still functioning? Any comments on simulation? Thanks.

Chongjing