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popphylotools / mvMapper

mvMapper (Multivariate Mapper) is an interactive data exploration tool for multivariate analyses with associated geographic location information.
https://popphylotools.github.io/mvMapper/
BSD 2-Clause "Simplified" License
9 stars 1 forks source link

Update defaults for each pulldown menu #45

Closed jrdupuis closed 7 years ago

jrdupuis commented 7 years ago

Now that everything will follow the same format, can we update the defaults for what is shown in the "X axis", "Y axis", "color by", "size by" pulldowns?

How it's written now, the new defaults should be: X-axis: PC1 Y-axis: PC2 color: grp size: support

"support" will still be a DAPC-only thing, but that's fine in my mind. I bring it up in the manuscript as an option for DAPC only.

fbremer commented 7 years ago

I think this should be set in the config file (re: #29) rather than having hard coded defaults. I'll keep this here to track the desired content of that file.

thibautjombart commented 7 years ago

Note that grp may also be absent, as we now allow other methods than DAPC. As far as I can tell, the only fields that will be always there are:

jrdupuis commented 7 years ago

Yeah, that sounds good @thibautjombart The defaults aren't that important, since you can always just switch whats displayed when you start up an instance of the app. I also make a note of using "grp" to refer to population in the manuscript.