We'd like to know how big of a rescaling factor do we need to run simulations of Drosophila (under the Sheehan & Song demographic model). We'd like to know, for instance, how long it takes to run simulations of varying sequence lengths with various rescaling factors using SLiM and a DFE (Johri et al and Huber et al; see this issue and this one).
My suggestion for how to do this is to do simulations of a bunch of small values of sequence length (say, up to a megabase) and a bunch of rescaling factors (say, 1-100); terminate jobs after 6 hours; and then extrapolate the timing of the jobs that finish out to where we want to be. (Also, have the jobs keep track of where they get to.)
We'd like to know how big of a rescaling factor do we need to run simulations of Drosophila (under the Sheehan & Song demographic model). We'd like to know, for instance, how long it takes to run simulations of varying sequence lengths with various rescaling factors using SLiM and a DFE (Johri et al and Huber et al; see this issue and this one).
My suggestion for how to do this is to do simulations of a bunch of small values of sequence length (say, up to a megabase) and a bunch of rescaling factors (say, 1-100); terminate jobs after 6 hours; and then extrapolate the timing of the jobs that finish out to where we want to be. (Also, have the jobs keep track of where they get to.)