popsim-consortium / analysis2

Analysis for the second consortium paper.
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Add multipopulation kind of analyses #49

Closed izabelcavassim closed 3 months ago

izabelcavassim commented 2 years ago

This would be done to infer multi-population demographic models (such as figure 4 in paper 1 here

Not sure if they have it implemented in the first repository analyses, if so we can easily use it as a template.

izabelcavassim commented 2 years ago

Softwares to be used are:

izabelcavassim commented 2 years ago

This was previously organized here: https://github.com/popsim-consortium/analysis/tree/master/two_population_analysis

izabelcavassim commented 2 years ago

we basically just need to add momi2 to the workflow and merge it to the way @andrewkern has set up the whole snakemake workflow. Maybe we could work on that together @andrewkern? Thanks