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popsim-consortium / analysis2

Analysis for the second consortium paper.
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pipeline fails with tiny_config #81

Closed silastittes closed 1 year ago

silastittes commented 1 year ago

Hi all! In hopes of reviewing @chriscrsmith's PR #80, I'm attempting to do a trial run with a fresh clone of his fork. I'm getting a boatload of errors, such as 

AttributeError in line 106 of /gpfs/home/stittes/playground/analysis2/workflows/dfe.snake:
'TreeSequence' object has no attribute 'remove_intervals'

My attempt was using the tiny_config.yaml, using the oregon configuration for our HPC (talapas). I didn't make any edits except pointing to the tiny_config.

My strong suspicion is this doesn't have anything to do with @chriscrsmith's PR, but is due to not having specific versions of dependencies in the environment.yml. I've attached the output of conda env export to show what gets built for me.

Can someone else with a working pipeline compare and/or post their conda env build to compare versions of tskit, etc.?

Thanks!

anaylsis2_full.txt

xin-huang commented 1 year ago

Here is my env

name: analysis2
channels:
  - conda-forge
  - bioconda
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_kmp_llvm
  - aioeasywebdav=2.4.0=pyha770c72_0
  - aiohttp=3.8.3=py310h5764c6d_1
  - aiosignal=1.3.1=pyhd8ed1ab_0
  - alsa-lib=1.2.8=h166bdaf_0
  - amply=0.1.5=pyhd8ed1ab_0
  - appdirs=1.4.4=pyh9f0ad1d_0
  - async-timeout=4.0.2=pyhd8ed1ab_0
  - attmap=0.13.2=pyhd8ed1ab_0
  - attr=2.5.1=h166bdaf_1
  - attrs=22.1.0=pyh71513ae_1
  - backports=1.0=pyhd8ed1ab_3
  - backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
  - bcrypt=3.2.2=py310h5764c6d_1
  - binutils_impl_linux-64=2.39=he00db2b_1
  - blas=2.116=openblas
  - blas-devel=3.9.0=16_linux64_openblas
  - boto3=1.26.15=pyhd8ed1ab_0
  - botocore=1.29.15=pyhd8ed1ab_0
  - brotli=1.0.9=h166bdaf_8
  - brotli-bin=1.0.9=h166bdaf_8
  - brotlipy=0.7.0=py310h5764c6d_1005
  - bzip2=1.0.8=h7f98852_4
  - c-ares=1.18.1=h7f98852_0
  - ca-certificates=2022.12.7=ha878542_0
  - cached-property=1.5.2=hd8ed1ab_1
  - cached_property=1.5.2=pyha770c72_1
  - cachetools=5.2.0=pyhd8ed1ab_0
  - cairo=1.16.0=ha61ee94_1014
  - certifi=2022.12.7=pyhd8ed1ab_0
  - cffi=1.15.1=py310h255011f_2
  - charset-normalizer=2.1.1=pyhd8ed1ab_0
  - coin-or-cbc=2.10.8=h3786ebc_0
  - coin-or-cgl=0.60.6=h6f57e76_2
  - coin-or-clp=1.17.7=hc56784d_2
  - coin-or-osi=0.108.7=h2720bb7_2
  - coin-or-utils=2.11.6=h202d8b1_2
  - coincbc=2.10.8=0_metapackage
  - colorama=0.4.6=pyhd8ed1ab_0
  - commonmark=0.9.1=py_0
  - conda=22.9.0=py310hff52083_2
  - conda-package-handling=1.9.0=py310h5764c6d_1
  - configargparse=1.5.3=pyhd8ed1ab_0
  - connection_pool=0.0.3=pyhd3deb0d_0
  - contourpy=1.0.6=py310hbf28c38_0
  - cryptography=38.0.3=py310h597c629_0
  - cycler=0.11.0=pyhd8ed1ab_0
  - cython=0.29.32=py310hd8f1fbe_1
  - dataclasses=0.8=pyhc8e2a94_3
  - datrie=0.8.2=py310h5764c6d_6
  - dbus=1.13.6=h5008d03_3
  - defusedxml=0.7.1=pyhd8ed1ab_0
  - docutils=0.19=py310hff52083_1
  - dpath=2.0.6=py310hff52083_2
  - dropbox=11.36.0=pyhd8ed1ab_0
  - exceptiongroup=1.0.4=pyhd8ed1ab_0
  - expat=2.5.0=h27087fc_0
  - fftw=3.3.10=nompi_hf0379b8_105
  - filechunkio=1.8=py_2
  - filelock=3.8.0=pyhd8ed1ab_0
  - fmt=9.1.0=h924138e_0
  - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
  - font-ttf-inconsolata=3.000=h77eed37_0
  - font-ttf-source-code-pro=2.038=h77eed37_0
  - font-ttf-ubuntu=0.83=hab24e00_0
  - fontconfig=2.14.1=hc2a2eb6_0
  - fonts-conda-ecosystem=1=0
  - fonts-conda-forge=1=0
  - fonttools=4.38.0=py310h5764c6d_1
  - freetype=2.12.1=hca18f0e_0
  - frozenlist=1.3.3=py310h5764c6d_0
  - ftputil=5.0.4=pyhd8ed1ab_0
  - future=0.18.2=pyhd8ed1ab_6
  - gcc=12.2.0=h26027b1_11
  - gcc_impl_linux-64=12.2.0=hcc96c02_19
  - gettext=0.21.1=h27087fc_0
  - gfortran=12.2.0=h8acd90e_11
  - gfortran_impl_linux-64=12.2.0=h55be85b_19
  - giflib=5.2.1=h36c2ea0_2
  - gitdb=4.0.9=pyhd8ed1ab_0
  - gitpython=3.1.29=pyhd8ed1ab_0
  - glib=2.74.1=h6239696_1
  - glib-tools=2.74.1=h6239696_1
  - gmp=6.2.1=h58526e2_0
  - google-api-core=2.10.2=pyhd8ed1ab_0
  - google-api-python-client=2.66.0=pyhd8ed1ab_0
  - google-auth=2.14.1=pyh1a96a4e_0
  - google-auth-httplib2=0.1.0=pyhd8ed1ab_1
  - google-cloud-core=2.3.2=pyhd8ed1ab_0
  - google-cloud-storage=2.6.0=pyh1a96a4e_0
  - google-crc32c=1.1.2=py310he8fe98e_4
  - google-resumable-media=2.4.0=pyhd8ed1ab_0
  - graphite2=1.3.13=h58526e2_1001
  - grpcio=1.49.1=py310h5b20944_1
  - gsl=2.7=he838d99_0
  - gst-plugins-base=1.21.2=h3e40eee_0
  - gstreamer=1.21.2=hd4edc92_0
  - gstreamer-orc=0.4.33=h166bdaf_0
  - gxx=12.2.0=h26027b1_11
  - gxx_impl_linux-64=12.2.0=hcc96c02_19
  - h5py=3.7.0=nompi_py310h416281c_102
  - harfbuzz=5.3.0=h418a68e_0
  - hdf5=1.12.2=nompi_h2386368_100
  - htslib=1.16=h6bc39ce_0
  - httplib2=0.21.0=pyhd8ed1ab_0
  - icu=70.1=h27087fc_0
  - idna=3.4=pyhd8ed1ab_0
  - importlib-metadata=5.0.0=pyha770c72_1
  - importlib_resources=5.10.0=pyhd8ed1ab_0
  - iniconfig=1.1.1=pyh9f0ad1d_0
  - jack=1.9.21=he978b8e_1
  - jinja2=3.1.2=pyhd8ed1ab_1
  - jmespath=1.0.1=pyhd8ed1ab_0
  - jpeg=9e=h166bdaf_2
  - jsonschema=4.17.1=pyhd8ed1ab_0
  - jupyter_core=5.0.0=py310hff52083_0
  - kernel-headers_linux-64=2.6.32=he073ed8_15
  - keyutils=1.6.1=h166bdaf_0
  - kiwisolver=1.4.4=py310hbf28c38_1
  - krb5=1.19.3=h3790be6_0
  - lame=3.100=h166bdaf_1003
  - lcms2=2.14=h6ed2654_0
  - ld_impl_linux-64=2.39=hcc3a1bd_1
  - ldc=1.28.1=hcf88599_0
  - lerc=4.0.0=h27087fc_0
  - libabseil=20220623.0=cxx17_h48a1fff_5
  - libarchive=3.5.2=hb890918_3
  - libblas=3.9.0=16_linux64_openblas
  - libbrotlicommon=1.0.9=h166bdaf_8
  - libbrotlidec=1.0.9=h166bdaf_8
  - libbrotlienc=1.0.9=h166bdaf_8
  - libcap=2.66=ha37c62d_0
  - libcblas=3.9.0=16_linux64_openblas
  - libclang=15.0.5=default_h2e3cab8_0
  - libclang13=15.0.5=default_h3a83d3e_0
  - libcrc32c=1.1.2=h9c3ff4c_0
  - libcups=2.3.3=h3e49a29_2
  - libcurl=7.86.0=h7bff187_1
  - libdb=6.2.32=h9c3ff4c_0
  - libdeflate=1.13=h166bdaf_0
  - libedit=3.1.20191231=he28a2e2_2
  - libev=4.33=h516909a_1
  - libevent=2.1.10=h9b69904_4
  - libffi=3.4.2=h7f98852_5
  - libflac=1.4.2=h27087fc_0
  - libgcc-devel_linux-64=12.2.0=h3b97bd3_19
  - libgcc-ng=12.2.0=h65d4601_19
  - libgcrypt=1.10.1=h166bdaf_0
  - libgfortran-ng=12.2.0=h69a702a_19
  - libgfortran5=12.2.0=h337968e_19
  - libglib=2.74.1=h606061b_1
  - libgomp=12.2.0=h65d4601_19
  - libgpg-error=1.45=hc0c96e0_0
  - libgrpc=1.49.1=h05bd8bd_1
  - libiconv=1.17=h166bdaf_0
  - liblapack=3.9.0=16_linux64_openblas
  - liblapacke=3.9.0=16_linux64_openblas
  - libllvm12=12.0.1=hf817b99_2
  - libllvm15=15.0.5=h63197d8_0
  - libmamba=1.0.0=hb5f4133_2
  - libmambapy=1.0.0=py310h8078c61_2
  - libnghttp2=1.47.0=hdcd2b5c_1
  - libnsl=2.0.0=h7f98852_0
  - libogg=1.3.4=h7f98852_1
  - libopenblas=0.3.21=pthreads_h78a6416_3
  - libopus=1.3.1=h7f98852_1
  - libpng=1.6.39=h753d276_0
  - libpq=14.5=hd77ab85_1
  - libprotobuf=3.21.9=h6239696_0
  - libsanitizer=12.2.0=h46fd767_19
  - libsndfile=1.1.0=h27087fc_0
  - libsodium=1.0.18=h36c2ea0_1
  - libsolv=0.7.22=h6239696_0
  - libsqlite=3.40.0=h753d276_0
  - libssh2=1.10.0=haa6b8db_3
  - libstdcxx-devel_linux-64=12.2.0=h3b97bd3_19
  - libstdcxx-ng=12.2.0=h46fd767_19
  - libsystemd0=252=h2a991cd_0
  - libtiff=4.4.0=h0e0dad5_3
  - libtool=2.4.6=h9c3ff4c_1008
  - libudev1=252=h166bdaf_0
  - libuuid=2.32.1=h7f98852_1000
  - libvorbis=1.3.7=h9c3ff4c_0
  - libwebp-base=1.2.4=h166bdaf_0
  - libxcb=1.13=h7f98852_1004
  - libxkbcommon=1.0.3=he3ba5ed_0
  - libxml2=2.10.3=h7463322_0
  - libzlib=1.2.13=h166bdaf_4
  - llvm-openmp=15.0.5=he0ac6c6_0
  - logmuse=0.2.6=pyh8c360ce_0
  - lz4-c=1.9.3=h9c3ff4c_1
  - lzo=2.10=h516909a_1000
  - mamba=1.0.0=py310hf87f941_2
  - markupsafe=2.1.1=py310h5764c6d_2
  - matplotlib=3.6.2=py310hff52083_0
  - matplotlib-base=3.6.2=py310h8d5ebf3_0
  - mpfr=4.1.0=h9202a9a_1
  - mpg123=1.30.2=h27087fc_1
  - multidict=6.0.2=py310h5764c6d_2
  - munkres=1.1.4=pyh9f0ad1d_0
  - mysql-common=8.0.31=haf5c9bc_0
  - mysql-libs=8.0.31=h28c427c_0
  - nbformat=5.7.0=pyhd8ed1ab_0
  - ncurses=6.3=h27087fc_1
  - nlopt=2.7.1=py310h3342525_3
  - nspr=4.32=h9c3ff4c_1
  - nss=3.78=h2350873_0
  - numpy=1.23.5=py310h53a5b5f_0
  - oauth2client=4.1.3=py_0
  - openblas=0.3.21=pthreads_h320a7e8_3
  - openjdk=17.0.3=hafdced1_4
  - openjpeg=2.5.0=h7d73246_1
  - openssl=1.1.1s=h0b41bf4_1
  - packaging=21.3=pyhd8ed1ab_0
  - pandas=1.5.2=py310h769672d_0
  - paramiko=2.12.0=pyhd8ed1ab_0
  - patsy=0.5.3=pyhd8ed1ab_0
  - pcre2=10.40=hc3806b6_0
  - peppy=0.35.3=pyhd8ed1ab_0
  - pillow=9.2.0=py310h454ad03_3
  - pip=22.3.1=pyhd8ed1ab_0
  - pixman=0.40.0=h36c2ea0_0
  - pkgutil-resolve-name=1.3.10=pyhd8ed1ab_0
  - plac=1.3.5=pyhd8ed1ab_0
  - platformdirs=2.5.2=pyhd8ed1ab_1
  - pluggy=1.0.0=pyhd8ed1ab_5
  - ply=3.11=py_1
  - prettytable=3.4.1=pyhd8ed1ab_0
  - protobuf=4.21.9=py310hd8f1fbe_0
  - psutil=5.9.4=py310h5764c6d_0
  - pthread-stubs=0.4=h36c2ea0_1001
  - pulp=2.7.0=py310hff52083_0
  - pulseaudio=16.1=h4a94279_0
  - pyasn1=0.4.8=py_0
  - pyasn1-modules=0.2.7=py_0
  - pybind11-abi=4=hd8ed1ab_3
  - pycosat=0.6.4=py310h5764c6d_1
  - pycparser=2.21=pyhd8ed1ab_0
  - pygments=2.13.0=pyhd8ed1ab_0
  - pynacl=1.5.0=py310h5764c6d_2
  - pyopenssl=22.1.0=pyhd8ed1ab_0
  - pyparsing=3.0.9=pyhd8ed1ab_0
  - pyqt=5.15.7=py310h29803b5_2
  - pyqt5-sip=12.11.0=py310hd8f1fbe_2
  - pyrsistent=0.19.2=py310h5764c6d_0
  - pysam=0.19.1=py310hff46b53_1
  - pysftp=0.2.9=py_1
  - pysocks=1.7.1=pyha2e5f31_6
  - pytest=7.2.0=pyhd8ed1ab_2
  - python=3.10.8=h257c98d_0_cpython
  - python-dateutil=2.8.2=pyhd8ed1ab_0
  - python-fastjsonschema=2.16.2=pyhd8ed1ab_0
  - python-irodsclient=1.1.5=pyhd8ed1ab_0
  - python_abi=3.10=3_cp310
  - pytz=2022.6=pyhd8ed1ab_0
  - pyu2f=0.1.5=pyhd8ed1ab_0
  - pyyaml=6.0=py310h5764c6d_5
  - qt-main=5.15.6=h7acdfc8_2
  - re2=2022.06.01=h27087fc_1
  - readline=8.1.2=h0f457ee_0
  - reproc=14.2.3=h7f98852_0
  - reproc-cpp=14.2.3=h9c3ff4c_0
  - requests=2.28.1=pyhd8ed1ab_1
  - reretry=0.11.1=pyhd8ed1ab_0
  - rich=12.6.0=pyhd8ed1ab_0
  - rsa=4.9=pyhd8ed1ab_0
  - ruamel_yaml=0.15.80=py310h5764c6d_1008
  - s3transfer=0.6.0=pyhd8ed1ab_0
  - scipy=1.9.3=py310hdfbd76f_2
  - seaborn=0.12.1=hd8ed1ab_0
  - seaborn-base=0.12.1=pyhd8ed1ab_0
  - setuptools=65.5.1=pyhd8ed1ab_0
  - setuptools-scm=7.0.5=pyhd8ed1ab_1
  - sip=6.7.5=py310hd8f1fbe_0
  - six=1.16.0=pyh6c4a22f_0
  - slacker=0.14.0=py_0
  - slim=4.0.1=h27087fc_1
  - smart_open=6.2.0=pyha770c72_0
  - smmap=3.0.5=pyh44b312d_0
  - snakemake=7.18.2=hdfd78af_1
  - snakemake-minimal=7.18.2=pyhdfd78af_1
  - sqlite=3.40.0=h4ff8645_0
  - statsmodels=0.13.5=py310hde88566_2
  - stone=3.3.1=pyhd8ed1ab_0
  - stopit=1.1.2=py_0
  - sysroot_linux-64=2.12=he073ed8_15
  - tabulate=0.9.0=pyhd8ed1ab_1
  - throttler=1.2.1=pyhd8ed1ab_0
  - tk=8.6.12=h27826a3_0
  - toml=0.10.2=pyhd8ed1ab_0
  - tomli=2.0.1=pyhd8ed1ab_0
  - toolz=0.12.0=pyhd8ed1ab_0
  - toposort=1.7=pyhd8ed1ab_0
  - tornado=6.2=py310h5764c6d_1
  - tqdm=4.64.1=pyhd8ed1ab_0
  - traitlets=5.5.0=pyhd8ed1ab_0
  - typing-extensions=4.4.0=hd8ed1ab_0
  - typing_extensions=4.4.0=pyha770c72_0
  - tzdata=2022f=h191b570_0
  - ubiquerg=0.6.2=pyhd8ed1ab_0
  - unicodedata2=15.0.0=py310h5764c6d_0
  - uritemplate=4.1.1=pyhd8ed1ab_0
  - urllib3=1.26.11=pyhd8ed1ab_0
  - veracitools=0.1.3=py_0
  - wcwidth=0.2.5=pyh9f0ad1d_2
  - wheel=0.38.4=pyhd8ed1ab_0
  - wrapt=1.14.1=py310h5764c6d_1
  - xcb-util=0.4.0=h516909a_0
  - xcb-util-image=0.4.0=h166bdaf_0
  - xcb-util-keysyms=0.4.0=h516909a_0
  - xcb-util-renderutil=0.3.9=h166bdaf_0
  - xcb-util-wm=0.4.1=h516909a_0
  - xorg-fixesproto=5.0=h7f98852_1002
  - xorg-inputproto=2.3.2=h7f98852_1002
  - xorg-kbproto=1.0.7=h7f98852_1002
  - xorg-libice=1.0.10=h7f98852_0
  - xorg-libsm=1.2.3=hd9c2040_1000
  - xorg-libx11=1.7.2=h7f98852_0
  - xorg-libxau=1.0.9=h7f98852_0
  - xorg-libxdmcp=1.1.3=h7f98852_0
  - xorg-libxext=1.3.4=h7f98852_1
  - xorg-libxfixes=5.0.3=h7f98852_1004
  - xorg-libxi=1.7.10=h7f98852_0
  - xorg-libxrender=0.9.10=h7f98852_1003
  - xorg-libxtst=1.2.3=h7f98852_1002
  - xorg-recordproto=1.14.2=h7f98852_1002
  - xorg-renderproto=0.11.1=h7f98852_1002
  - xorg-xextproto=7.3.0=h7f98852_1002
  - xorg-xproto=7.0.31=h7f98852_1007
  - xz=5.2.6=h166bdaf_0
  - yaml=0.2.5=h7f98852_2
  - yaml-cpp=0.7.0=h27087fc_2
  - yarl=1.8.1=py310h5764c6d_0
  - yte=1.5.1=py310hff52083_1
  - zipp=3.10.0=pyhd8ed1ab_0
  - zlib=1.2.13=h166bdaf_4
  - zstd=1.5.2=h6239696_4
  - pip:
    - click==8.1.3
    - cloudpickle==2.2.0
    - dadi==2.2.0
    - dadi-cli==0.8.1
    - dask==2022.11.1
    - demes==0.2.2
    - fsspec==2022.11.0
    - googleapis-common-protos==1.57.0
    - humanize==4.4.0
    - locket==1.0.0
    - msprime==1.2.0
    - newick==1.3.2
    - partd==1.3.0
    - pyslim==1.0.1
    - ruamel-yaml==0.17.21
    - ruamel-yaml-clib==0.2.7
    - scikit-allel==1.3.5
    - stdpopsim==0.2.1.dev11+ga229273.d20221129
    - svgwrite==1.4.3
    - tskit==0.5.3

I modified my local stdpopsim.

silastittes commented 1 year ago

Thanks @xin-huang! Here's a diff between the two 

name: analysis2                             name: analysis2
channels:                               channels:
  - bioconda                            <       
  - conda-forge                               - conda-forge
                                >         - bioconda
  - defaults                                  - defaults
dependencies:                               dependencies:
  - _libgcc_mutex=0.1=conda_forge                     - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_kmp_llvm                      - _openmp_mutex=4.5=2_kmp_llvm
  - aioeasywebdav=2.4.0=pyha770c72_0                      - aioeasywebdav=2.4.0=pyha770c72_0
  - aiohttp=3.8.3=py310h5764c6d_1                     - aiohttp=3.8.3=py310h5764c6d_1
  - aiosignal=1.3.1=pyhd8ed1ab_0                      - aiosignal=1.3.1=pyhd8ed1ab_0
  - alsa-lib=1.2.8=h166bdaf_0                         - alsa-lib=1.2.8=h166bdaf_0
  - amply=0.1.5=pyhd8ed1ab_0                          - amply=0.1.5=pyhd8ed1ab_0
  - appdirs=1.4.4=pyh9f0ad1d_0                        - appdirs=1.4.4=pyh9f0ad1d_0
  - async-timeout=4.0.2=pyhd8ed1ab_0                      - async-timeout=4.0.2=pyhd8ed1ab_0
  - attmap=0.13.2=pyhd8ed1ab_0                        - attmap=0.13.2=pyhd8ed1ab_0
  - attr=2.5.1=h166bdaf_1                         - attr=2.5.1=h166bdaf_1
  - attrs=22.1.0=pyh71513ae_1                         - attrs=22.1.0=pyh71513ae_1
  - backports=1.0=pyhd8ed1ab_3                        - backports=1.0=pyhd8ed1ab_3
  - backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0              - backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
  - bcrypt=3.2.2=py310h5764c6d_1                      - bcrypt=3.2.2=py310h5764c6d_1
  - binutils_impl_linux-64=2.39=he00db2b_1                - binutils_impl_linux-64=2.39=he00db2b_1
  - blas=2.116=openblas                           - blas=2.116=openblas
  - blas-devel=3.9.0=16_linux64_openblas                  - blas-devel=3.9.0=16_linux64_openblas
  - boto3=1.26.17=pyhd8ed1ab_0                  |         - boto3=1.26.15=pyhd8ed1ab_0
  - botocore=1.29.18=pyhd8ed1ab_0               |         - botocore=1.29.15=pyhd8ed1ab_0
  - brotli=1.0.9=h166bdaf_8                       - brotli=1.0.9=h166bdaf_8
  - brotli-bin=1.0.9=h166bdaf_8                       - brotli-bin=1.0.9=h166bdaf_8
  - brotlipy=0.7.0=py310h5764c6d_1005                     - brotlipy=0.7.0=py310h5764c6d_1005
  - bzip2=1.0.8=h7f98852_4                        - bzip2=1.0.8=h7f98852_4
  - c-ares=1.18.1=h7f98852_0                          - c-ares=1.18.1=h7f98852_0
  - ca-certificates=2022.9.24=ha878542_0            |         - ca-certificates=2022.12.7=ha878542_0
  - cached-property=1.5.2=hd8ed1ab_1                      - cached-property=1.5.2=hd8ed1ab_1
  - cached_property=1.5.2=pyha770c72_1                    - cached_property=1.5.2=pyha770c72_1
  - cachetools=5.2.0=pyhd8ed1ab_0                     - cachetools=5.2.0=pyhd8ed1ab_0
  - cairo=1.16.0=ha61ee94_1014                        - cairo=1.16.0=ha61ee94_1014
  - certifi=2022.9.24=pyhd8ed1ab_0              |         - certifi=2022.12.7=pyhd8ed1ab_0
  - cffi=1.15.1=py310h255011f_2                       - cffi=1.15.1=py310h255011f_2
  - charset-normalizer=2.1.1=pyhd8ed1ab_0                 - charset-normalizer=2.1.1=pyhd8ed1ab_0
  - coin-or-cbc=2.10.8=h3786ebc_0                     - coin-or-cbc=2.10.8=h3786ebc_0
  - coin-or-cgl=0.60.6=h6f57e76_2                     - coin-or-cgl=0.60.6=h6f57e76_2
  - coin-or-clp=1.17.7=hc56784d_2                     - coin-or-clp=1.17.7=hc56784d_2
  - coin-or-osi=0.108.7=h2720bb7_2                    - coin-or-osi=0.108.7=h2720bb7_2
  - coin-or-utils=2.11.6=h202d8b1_2                   - coin-or-utils=2.11.6=h202d8b1_2
  - coincbc=2.10.8=0_metapackage                      - coincbc=2.10.8=0_metapackage
  - colorama=0.4.6=pyhd8ed1ab_0                       - colorama=0.4.6=pyhd8ed1ab_0
  - commonmark=0.9.1=py_0                         - commonmark=0.9.1=py_0
  - conda=22.9.0=py310hff52083_2                      - conda=22.9.0=py310hff52083_2
  - conda-package-handling=1.9.0=py310h5764c6d_1              - conda-package-handling=1.9.0=py310h5764c6d_1
  - configargparse=1.5.3=pyhd8ed1ab_0                     - configargparse=1.5.3=pyhd8ed1ab_0
  - connection_pool=0.0.3=pyhd3deb0d_0                    - connection_pool=0.0.3=pyhd3deb0d_0
  - contourpy=1.0.6=py310hbf28c38_0                   - contourpy=1.0.6=py310hbf28c38_0
  - cryptography=38.0.4=py310h597c629_0             |         - cryptography=38.0.3=py310h597c629_0
  - cycler=0.11.0=pyhd8ed1ab_0                        - cycler=0.11.0=pyhd8ed1ab_0
  - cython=0.29.32=py310hd8f1fbe_1                    - cython=0.29.32=py310hd8f1fbe_1
  - dadi=2.2.0=py310h293c751_0                  <       
  - dataclasses=0.8=pyhc8e2a94_3                      - dataclasses=0.8=pyhc8e2a94_3
  - datrie=0.8.2=py310h5764c6d_6                      - datrie=0.8.2=py310h5764c6d_6
  - dbus=1.13.6=h5008d03_3                        - dbus=1.13.6=h5008d03_3
  - defusedxml=0.7.1=pyhd8ed1ab_0                     - defusedxml=0.7.1=pyhd8ed1ab_0
  - docutils=0.19=py310hff52083_1                     - docutils=0.19=py310hff52083_1
  - dpath=2.0.8=py310hff52083_0                 |         - dpath=2.0.6=py310hff52083_2
  - dropbox=11.36.0=pyhd8ed1ab_0                      - dropbox=11.36.0=pyhd8ed1ab_0
  - exceptiongroup=1.0.4=pyhd8ed1ab_0                     - exceptiongroup=1.0.4=pyhd8ed1ab_0
  - expat=2.5.0=h27087fc_0                        - expat=2.5.0=h27087fc_0
  - fftw=3.3.10=nompi_hf0379b8_105                    - fftw=3.3.10=nompi_hf0379b8_105
  - filechunkio=1.8=py_2                          - filechunkio=1.8=py_2
  - filelock=3.8.0=pyhd8ed1ab_0                       - filelock=3.8.0=pyhd8ed1ab_0
  - fmt=9.1.0=h924138e_0                          - fmt=9.1.0=h924138e_0
  - font-ttf-dejavu-sans-mono=2.37=hab24e00_0                 - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
  - font-ttf-inconsolata=3.000=h77eed37_0                 - font-ttf-inconsolata=3.000=h77eed37_0
  - font-ttf-source-code-pro=2.038=h77eed37_0                 - font-ttf-source-code-pro=2.038=h77eed37_0
  - font-ttf-ubuntu=0.83=hab24e00_0                   - font-ttf-ubuntu=0.83=hab24e00_0
  - fontconfig=2.14.1=hc2a2eb6_0                      - fontconfig=2.14.1=hc2a2eb6_0
  - fonts-conda-ecosystem=1=0                         - fonts-conda-ecosystem=1=0
  - fonts-conda-forge=1=0                         - fonts-conda-forge=1=0
  - fonttools=4.38.0=py310h5764c6d_1                      - fonttools=4.38.0=py310h5764c6d_1
  - freetype=2.12.1=hca18f0e_1                  |         - freetype=2.12.1=hca18f0e_0
  - frozenlist=1.3.3=py310h5764c6d_0                      - frozenlist=1.3.3=py310h5764c6d_0
  - ftputil=5.0.4=pyhd8ed1ab_0                        - ftputil=5.0.4=pyhd8ed1ab_0
  - future=0.18.2=pyhd8ed1ab_6                        - future=0.18.2=pyhd8ed1ab_6
  - gcc=12.2.0=h26027b1_11                        - gcc=12.2.0=h26027b1_11
  - gcc_impl_linux-64=12.2.0=hcc96c02_19                  - gcc_impl_linux-64=12.2.0=hcc96c02_19
  - gettext=0.21.1=h27087fc_0                         - gettext=0.21.1=h27087fc_0
  - gfortran=12.2.0=h8acd90e_11                       - gfortran=12.2.0=h8acd90e_11
  - gfortran_impl_linux-64=12.2.0=h55be85b_19                 - gfortran_impl_linux-64=12.2.0=h55be85b_19
  - giflib=5.2.1=h36c2ea0_2                       - giflib=5.2.1=h36c2ea0_2
  - gitdb=4.0.10=pyhd8ed1ab_0                   |         - gitdb=4.0.9=pyhd8ed1ab_0
  - gitpython=3.1.29=pyhd8ed1ab_0                     - gitpython=3.1.29=pyhd8ed1ab_0
  - glib=2.74.1=h6239696_1                        - glib=2.74.1=h6239696_1
  - glib-tools=2.74.1=h6239696_1                      - glib-tools=2.74.1=h6239696_1
  - gmp=6.2.1=h58526e2_0                          - gmp=6.2.1=h58526e2_0
  - google-api-core=2.10.2=pyhd8ed1ab_0                   - google-api-core=2.10.2=pyhd8ed1ab_0
  - google-api-python-client=2.66.0=pyhd8ed1ab_0              - google-api-python-client=2.66.0=pyhd8ed1ab_0
  - google-auth=2.14.1=pyh1a96a4e_0                   - google-auth=2.14.1=pyh1a96a4e_0
  - google-auth-httplib2=0.1.0=pyhd8ed1ab_1               - google-auth-httplib2=0.1.0=pyhd8ed1ab_1
  - google-cloud-core=2.3.2=pyhd8ed1ab_0                  - google-cloud-core=2.3.2=pyhd8ed1ab_0
  - google-cloud-storage=2.6.0=pyh1a96a4e_0               - google-cloud-storage=2.6.0=pyh1a96a4e_0
  - google-crc32c=1.1.2=py310he8fe98e_4                   - google-crc32c=1.1.2=py310he8fe98e_4
  - google-resumable-media=2.4.0=pyhd8ed1ab_0                 - google-resumable-media=2.4.0=pyhd8ed1ab_0
  - googleapis-common-protos=1.57.0=pyhd8ed1ab_3        <       
  - graphite2=1.3.13=h58526e2_1001                    - graphite2=1.3.13=h58526e2_1001
  - grpcio=1.49.1=py310h5b20944_1                     - grpcio=1.49.1=py310h5b20944_1
  - gsl=2.7=he838d99_0                            - gsl=2.7=he838d99_0
  - gst-plugins-base=1.21.2=h3e40eee_0                    - gst-plugins-base=1.21.2=h3e40eee_0
  - gstreamer=1.21.2=hd4edc92_0                       - gstreamer=1.21.2=hd4edc92_0
  - gstreamer-orc=0.4.33=h166bdaf_0                   - gstreamer-orc=0.4.33=h166bdaf_0
  - gxx=12.2.0=h26027b1_11                        - gxx=12.2.0=h26027b1_11
  - gxx_impl_linux-64=12.2.0=hcc96c02_19                  - gxx_impl_linux-64=12.2.0=hcc96c02_19
  - h5py=3.7.0=nompi_py310h416281c_102                    - h5py=3.7.0=nompi_py310h416281c_102
  - harfbuzz=5.3.0=h418a68e_0                         - harfbuzz=5.3.0=h418a68e_0
  - hdf5=1.12.2=nompi_h2386368_100                    - hdf5=1.12.2=nompi_h2386368_100
  - htslib=1.16=h6bc39ce_0                        - htslib=1.16=h6bc39ce_0
  - httplib2=0.21.0=pyhd8ed1ab_0                      - httplib2=0.21.0=pyhd8ed1ab_0
  - icu=70.1=h27087fc_0                           - icu=70.1=h27087fc_0
  - idna=3.4=pyhd8ed1ab_0                         - idna=3.4=pyhd8ed1ab_0
  - importlib-metadata=5.1.0=pyha770c72_0           |         - importlib-metadata=5.0.0=pyha770c72_1
  - importlib_resources=5.10.0=pyhd8ed1ab_0               - importlib_resources=5.10.0=pyhd8ed1ab_0
  - iniconfig=1.1.1=pyh9f0ad1d_0                      - iniconfig=1.1.1=pyh9f0ad1d_0
  - jack=1.9.21=he978b8e_1                        - jack=1.9.21=he978b8e_1
  - jinja2=3.1.2=pyhd8ed1ab_1                         - jinja2=3.1.2=pyhd8ed1ab_1
  - jmespath=1.0.1=pyhd8ed1ab_0                       - jmespath=1.0.1=pyhd8ed1ab_0
  - jpeg=9e=h166bdaf_2                            - jpeg=9e=h166bdaf_2
  - jsonschema=4.17.1=pyhd8ed1ab_0                    - jsonschema=4.17.1=pyhd8ed1ab_0
  - jupyter_core=5.0.0=py310hff52083_0                    - jupyter_core=5.0.0=py310hff52083_0
  - kernel-headers_linux-64=2.6.32=he073ed8_15                - kernel-headers_linux-64=2.6.32=he073ed8_15
  - keyutils=1.6.1=h166bdaf_0                         - keyutils=1.6.1=h166bdaf_0
  - kiwisolver=1.4.4=py310hbf28c38_1                      - kiwisolver=1.4.4=py310hbf28c38_1
  - krb5=1.19.3=h3790be6_0                        - krb5=1.19.3=h3790be6_0
  - lame=3.100=h166bdaf_1003                          - lame=3.100=h166bdaf_1003
  - lcms2=2.14=h6ed2654_0                         - lcms2=2.14=h6ed2654_0
  - ld_impl_linux-64=2.39=hcc3a1bd_1                      - ld_impl_linux-64=2.39=hcc3a1bd_1
  - ldc=1.28.1=hcf88599_0                         - ldc=1.28.1=hcf88599_0
  - lerc=4.0.0=h27087fc_0                         - lerc=4.0.0=h27087fc_0
  - libabseil=20220623.0=cxx17_h48a1fff_5                 - libabseil=20220623.0=cxx17_h48a1fff_5
  - libarchive=3.5.2=hb890918_3                       - libarchive=3.5.2=hb890918_3
  - libblas=3.9.0=16_linux64_openblas                     - libblas=3.9.0=16_linux64_openblas
  - libbrotlicommon=1.0.9=h166bdaf_8                      - libbrotlicommon=1.0.9=h166bdaf_8
  - libbrotlidec=1.0.9=h166bdaf_8                     - libbrotlidec=1.0.9=h166bdaf_8
  - libbrotlienc=1.0.9=h166bdaf_8                     - libbrotlienc=1.0.9=h166bdaf_8
  - libcap=2.66=ha37c62d_0                        - libcap=2.66=ha37c62d_0
  - libcblas=3.9.0=16_linux64_openblas                    - libcblas=3.9.0=16_linux64_openblas
  - libclang=15.0.5=default_h2e3cab8_0                    - libclang=15.0.5=default_h2e3cab8_0
  - libclang13=15.0.5=default_h3a83d3e_0                  - libclang13=15.0.5=default_h3a83d3e_0
  - libcrc32c=1.1.2=h9c3ff4c_0                        - libcrc32c=1.1.2=h9c3ff4c_0
  - libcups=2.3.3=h3e49a29_2                          - libcups=2.3.3=h3e49a29_2
  - libcurl=7.86.0=h7bff187_1                         - libcurl=7.86.0=h7bff187_1
  - libdb=6.2.32=h9c3ff4c_0                       - libdb=6.2.32=h9c3ff4c_0
  - libdeflate=1.13=h166bdaf_0                        - libdeflate=1.13=h166bdaf_0
  - libedit=3.1.20191231=he28a2e2_2                   - libedit=3.1.20191231=he28a2e2_2
  - libev=4.33=h516909a_1                         - libev=4.33=h516909a_1
  - libevent=2.1.10=h9b69904_4                        - libevent=2.1.10=h9b69904_4
  - libffi=3.4.2=h7f98852_5                       - libffi=3.4.2=h7f98852_5
  - libflac=1.4.2=h27087fc_0                          - libflac=1.4.2=h27087fc_0
  - libgcc-devel_linux-64=12.2.0=h3b97bd3_19                  - libgcc-devel_linux-64=12.2.0=h3b97bd3_19
  - libgcc-ng=12.2.0=h65d4601_19                      - libgcc-ng=12.2.0=h65d4601_19
  - libgcrypt=1.10.1=h166bdaf_0                       - libgcrypt=1.10.1=h166bdaf_0
  - libgfortran-ng=12.2.0=h69a702a_19                     - libgfortran-ng=12.2.0=h69a702a_19
  - libgfortran5=12.2.0=h337968e_19                   - libgfortran5=12.2.0=h337968e_19
  - libglib=2.74.1=h606061b_1                         - libglib=2.74.1=h606061b_1
  - libgomp=12.2.0=h65d4601_19                        - libgomp=12.2.0=h65d4601_19
  - libgpg-error=1.45=hc0c96e0_0                      - libgpg-error=1.45=hc0c96e0_0
  - libgrpc=1.49.1=h05bd8bd_1                         - libgrpc=1.49.1=h05bd8bd_1
  - libiconv=1.17=h166bdaf_0                          - libiconv=1.17=h166bdaf_0
  - liblapack=3.9.0=16_linux64_openblas                   - liblapack=3.9.0=16_linux64_openblas
  - liblapacke=3.9.0=16_linux64_openblas                  - liblapacke=3.9.0=16_linux64_openblas
  - libllvm12=12.0.1=hf817b99_2                       - libllvm12=12.0.1=hf817b99_2
  - libllvm15=15.0.5=h63197d8_0                       - libllvm15=15.0.5=h63197d8_0
  - libmamba=1.1.0=h2c5f835_2                   |         - libmamba=1.0.0=hb5f4133_2
  - libmambapy=1.1.0=py310h5976e0f_2                |         - libmambapy=1.0.0=py310h8078c61_2
  - libnghttp2=1.47.0=hdcd2b5c_1                      - libnghttp2=1.47.0=hdcd2b5c_1
  - libnsl=2.0.0=h7f98852_0                       - libnsl=2.0.0=h7f98852_0
  - libogg=1.3.4=h7f98852_1                       - libogg=1.3.4=h7f98852_1
  - libopenblas=0.3.21=pthreads_h78a6416_3                - libopenblas=0.3.21=pthreads_h78a6416_3
  - libopus=1.3.1=h7f98852_1                          - libopus=1.3.1=h7f98852_1
  - libpng=1.6.39=h753d276_0                          - libpng=1.6.39=h753d276_0
  - libpq=14.5=hd77ab85_1                         - libpq=14.5=hd77ab85_1
  - libprotobuf=3.21.9=h6239696_0                     - libprotobuf=3.21.9=h6239696_0
  - libsanitizer=12.2.0=h46fd767_19                   - libsanitizer=12.2.0=h46fd767_19
  - libsndfile=1.1.0=h27087fc_0                       - libsndfile=1.1.0=h27087fc_0
  - libsodium=1.0.18=h36c2ea0_1                       - libsodium=1.0.18=h36c2ea0_1
  - libsolv=0.7.22=h6239696_0                         - libsolv=0.7.22=h6239696_0
  - libsqlite=3.40.0=h753d276_0                       - libsqlite=3.40.0=h753d276_0
  - libssh2=1.10.0=haa6b8db_3                         - libssh2=1.10.0=haa6b8db_3
  - libstdcxx-devel_linux-64=12.2.0=h3b97bd3_19               - libstdcxx-devel_linux-64=12.2.0=h3b97bd3_19
  - libstdcxx-ng=12.2.0=h46fd767_19                   - libstdcxx-ng=12.2.0=h46fd767_19
  - libsystemd0=252=h2a991cd_0                        - libsystemd0=252=h2a991cd_0
  - libtiff=4.4.0=h0e0dad5_3                          - libtiff=4.4.0=h0e0dad5_3
  - libtool=2.4.6=h9c3ff4c_1008                       - libtool=2.4.6=h9c3ff4c_1008
  - libudev1=252=h166bdaf_0                       - libudev1=252=h166bdaf_0
  - libuuid=2.32.1=h7f98852_1000                      - libuuid=2.32.1=h7f98852_1000
  - libvorbis=1.3.7=h9c3ff4c_0                        - libvorbis=1.3.7=h9c3ff4c_0
  - libwebp-base=1.2.4=h166bdaf_0                     - libwebp-base=1.2.4=h166bdaf_0
  - libxcb=1.13=h7f98852_1004                         - libxcb=1.13=h7f98852_1004
  - libxkbcommon=1.0.3=he3ba5ed_0                     - libxkbcommon=1.0.3=he3ba5ed_0
  - libxml2=2.10.3=h7463322_0                         - libxml2=2.10.3=h7463322_0
  - libzlib=1.2.13=h166bdaf_4                         - libzlib=1.2.13=h166bdaf_4
  - llvm-openmp=15.0.5=he0ac6c6_0                     - llvm-openmp=15.0.5=he0ac6c6_0
  - logmuse=0.2.6=pyh8c360ce_0                        - logmuse=0.2.6=pyh8c360ce_0
  - lz4-c=1.9.3=h9c3ff4c_1                        - lz4-c=1.9.3=h9c3ff4c_1
  - lzo=2.10=h516909a_1000                        - lzo=2.10=h516909a_1000
  - mamba=1.1.0=py310hf87f941_2                 |         - mamba=1.0.0=py310hf87f941_2
  - markupsafe=2.1.1=py310h5764c6d_2                      - markupsafe=2.1.1=py310h5764c6d_2
  - matplotlib=3.6.2=py310hff52083_0                      - matplotlib=3.6.2=py310hff52083_0
  - matplotlib-base=3.6.2=py310h8d5ebf3_0                 - matplotlib-base=3.6.2=py310h8d5ebf3_0
  - mpfr=4.1.0=h9202a9a_1                         - mpfr=4.1.0=h9202a9a_1
  - mpg123=1.30.2=h27087fc_1                          - mpg123=1.30.2=h27087fc_1
  - multidict=6.0.2=py310h5764c6d_2                   - multidict=6.0.2=py310h5764c6d_2
  - munkres=1.1.4=pyh9f0ad1d_0                        - munkres=1.1.4=pyh9f0ad1d_0
  - mysql-common=8.0.31=haf5c9bc_0                    - mysql-common=8.0.31=haf5c9bc_0
  - mysql-libs=8.0.31=h28c427c_0                      - mysql-libs=8.0.31=h28c427c_0
  - nbformat=5.7.0=pyhd8ed1ab_0                       - nbformat=5.7.0=pyhd8ed1ab_0
  - ncurses=6.3=h27087fc_1                        - ncurses=6.3=h27087fc_1
  - nlopt=2.7.1=py310h3342525_3                       - nlopt=2.7.1=py310h3342525_3
  - nspr=4.32=h9c3ff4c_1                          - nspr=4.32=h9c3ff4c_1
  - nss=3.78=h2350873_0                           - nss=3.78=h2350873_0
  - numpy=1.23.5=py310h53a5b5f_0                      - numpy=1.23.5=py310h53a5b5f_0
  - oauth2client=4.1.3=py_0                       - oauth2client=4.1.3=py_0
  - openblas=0.3.21=pthreads_h320a7e8_3                   - openblas=0.3.21=pthreads_h320a7e8_3
  - openjdk=17.0.3=hafdced1_4                         - openjdk=17.0.3=hafdced1_4
  - openjpeg=2.5.0=h7d73246_1                         - openjpeg=2.5.0=h7d73246_1
  - openssl=1.1.1s=h166bdaf_0                   |         - openssl=1.1.1s=h0b41bf4_1
  - packaging=21.3=pyhd8ed1ab_0                       - packaging=21.3=pyhd8ed1ab_0
  - pandas=1.5.2=py310h769672d_0                      - pandas=1.5.2=py310h769672d_0
  - paramiko=2.12.0=pyhd8ed1ab_0                      - paramiko=2.12.0=pyhd8ed1ab_0
  - patsy=0.5.3=pyhd8ed1ab_0                          - patsy=0.5.3=pyhd8ed1ab_0
  - pcre2=10.40=hc3806b6_0                        - pcre2=10.40=hc3806b6_0
  - peppy=0.35.3=pyhd8ed1ab_0                         - peppy=0.35.3=pyhd8ed1ab_0
  - pillow=9.2.0=py310h454ad03_3                      - pillow=9.2.0=py310h454ad03_3
  - pip=22.3.1=pyhd8ed1ab_0                       - pip=22.3.1=pyhd8ed1ab_0
  - pixman=0.40.0=h36c2ea0_0                          - pixman=0.40.0=h36c2ea0_0
  - pkgutil-resolve-name=1.3.10=pyhd8ed1ab_0                  - pkgutil-resolve-name=1.3.10=pyhd8ed1ab_0
  - plac=1.3.5=pyhd8ed1ab_0                       - plac=1.3.5=pyhd8ed1ab_0
  - platformdirs=2.5.2=pyhd8ed1ab_1                   - platformdirs=2.5.2=pyhd8ed1ab_1
  - pluggy=1.0.0=pyhd8ed1ab_5                         - pluggy=1.0.0=pyhd8ed1ab_5
  - ply=3.11=py_1                             - ply=3.11=py_1
  - prettytable=3.5.0=pyhd8ed1ab_0              |         - prettytable=3.4.1=pyhd8ed1ab_0
  - protobuf=4.21.9=py310hd8f1fbe_0                   - protobuf=4.21.9=py310hd8f1fbe_0
  - psutil=5.9.4=py310h5764c6d_0                      - psutil=5.9.4=py310h5764c6d_0
  - pthread-stubs=0.4=h36c2ea0_1001                   - pthread-stubs=0.4=h36c2ea0_1001
  - pulp=2.7.0=py310hff52083_0                        - pulp=2.7.0=py310hff52083_0
  - pulseaudio=16.1=h4a94279_0                        - pulseaudio=16.1=h4a94279_0
  - pyasn1=0.4.8=py_0                             - pyasn1=0.4.8=py_0
  - pyasn1-modules=0.2.7=py_0                         - pyasn1-modules=0.2.7=py_0
  - pybind11-abi=4=hd8ed1ab_3                         - pybind11-abi=4=hd8ed1ab_3
  - pycosat=0.6.4=py310h5764c6d_1                     - pycosat=0.6.4=py310h5764c6d_1
  - pycparser=2.21=pyhd8ed1ab_0                       - pycparser=2.21=pyhd8ed1ab_0
  - pygments=2.13.0=pyhd8ed1ab_0                      - pygments=2.13.0=pyhd8ed1ab_0
  - pynacl=1.5.0=py310h5764c6d_2                      - pynacl=1.5.0=py310h5764c6d_2
  - pyopenssl=22.1.0=pyhd8ed1ab_0                     - pyopenssl=22.1.0=pyhd8ed1ab_0
  - pyparsing=3.0.9=pyhd8ed1ab_0                      - pyparsing=3.0.9=pyhd8ed1ab_0
  - pyqt=5.15.7=py310h29803b5_2                       - pyqt=5.15.7=py310h29803b5_2
  - pyqt5-sip=12.11.0=py310hd8f1fbe_2                     - pyqt5-sip=12.11.0=py310hd8f1fbe_2
  - pyrsistent=0.19.2=py310h5764c6d_0                     - pyrsistent=0.19.2=py310h5764c6d_0
  - pysam=0.19.1=py310hff46b53_1                      - pysam=0.19.1=py310hff46b53_1
  - pysftp=0.2.9=py_1                             - pysftp=0.2.9=py_1
  - pysocks=1.7.1=pyha2e5f31_6                        - pysocks=1.7.1=pyha2e5f31_6
  - pytest=7.2.0=pyhd8ed1ab_2                         - pytest=7.2.0=pyhd8ed1ab_2
  - python=3.10.8=h257c98d_0_cpython                      - python=3.10.8=h257c98d_0_cpython
  - python-dateutil=2.8.2=pyhd8ed1ab_0                    - python-dateutil=2.8.2=pyhd8ed1ab_0
  - python-fastjsonschema=2.16.2=pyhd8ed1ab_0                 - python-fastjsonschema=2.16.2=pyhd8ed1ab_0
  - python-irodsclient=1.1.5=pyhd8ed1ab_0                 - python-irodsclient=1.1.5=pyhd8ed1ab_0
  - python_abi=3.10=3_cp310                       - python_abi=3.10=3_cp310
  - pytz=2022.6=pyhd8ed1ab_0                          - pytz=2022.6=pyhd8ed1ab_0
  - pyu2f=0.1.5=pyhd8ed1ab_0                          - pyu2f=0.1.5=pyhd8ed1ab_0
  - pyyaml=6.0=py310h5764c6d_5                        - pyyaml=6.0=py310h5764c6d_5
  - qt-main=5.15.6=h7acdfc8_2                         - qt-main=5.15.6=h7acdfc8_2
  - re2=2022.06.01=h27087fc_1                         - re2=2022.06.01=h27087fc_1
  - readline=8.1.2=h0f457ee_0                         - readline=8.1.2=h0f457ee_0
  - reproc=14.2.3=h7f98852_0                          - reproc=14.2.3=h7f98852_0
  - reproc-cpp=14.2.3=h9c3ff4c_0                      - reproc-cpp=14.2.3=h9c3ff4c_0
  - requests=2.28.1=pyhd8ed1ab_1                      - requests=2.28.1=pyhd8ed1ab_1
  - reretry=0.11.1=pyhd8ed1ab_0                       - reretry=0.11.1=pyhd8ed1ab_0
  - rich=12.6.0=pyhd8ed1ab_0                          - rich=12.6.0=pyhd8ed1ab_0
  - rsa=4.9=pyhd8ed1ab_0                          - rsa=4.9=pyhd8ed1ab_0
  - ruamel_yaml=0.15.80=py310h5764c6d_1008                - ruamel_yaml=0.15.80=py310h5764c6d_1008
  - s3transfer=0.6.0=pyhd8ed1ab_0                     - s3transfer=0.6.0=pyhd8ed1ab_0
  - scipy=1.9.3=py310hdfbd76f_2                       - scipy=1.9.3=py310hdfbd76f_2
  - seaborn=0.12.1=hd8ed1ab_0                         - seaborn=0.12.1=hd8ed1ab_0
  - seaborn-base=0.12.1=pyhd8ed1ab_0                      - seaborn-base=0.12.1=pyhd8ed1ab_0
  - setuptools=65.5.1=pyhd8ed1ab_0                    - setuptools=65.5.1=pyhd8ed1ab_0
  - setuptools-scm=7.0.5=pyhd8ed1ab_1                     - setuptools-scm=7.0.5=pyhd8ed1ab_1
  - sip=6.7.5=py310hd8f1fbe_0                         - sip=6.7.5=py310hd8f1fbe_0
  - six=1.16.0=pyh6c4a22f_0                       - six=1.16.0=pyh6c4a22f_0
  - slacker=0.14.0=py_0                           - slacker=0.14.0=py_0
  - slim=4.0=h27087fc_0                     |         - slim=4.0.1=h27087fc_1
  - smart_open=6.2.0=pyha770c72_0                     - smart_open=6.2.0=pyha770c72_0
  - smmap=3.0.5=pyh44b312d_0                          - smmap=3.0.5=pyh44b312d_0
  - snakemake=7.18.2=hdfd78af_1                       - snakemake=7.18.2=hdfd78af_1
  - snakemake-minimal=7.18.2=pyhdfd78af_1                 - snakemake-minimal=7.18.2=pyhdfd78af_1
  - sqlite=3.40.0=h4ff8645_0                          - sqlite=3.40.0=h4ff8645_0
  - statsmodels=0.13.5=py310hde88566_2                    - statsmodels=0.13.5=py310hde88566_2
  - stone=3.3.1=pyhd8ed1ab_0                          - stone=3.3.1=pyhd8ed1ab_0
  - stopit=1.1.2=py_0                             - stopit=1.1.2=py_0
  - sysroot_linux-64=2.12=he073ed8_15                     - sysroot_linux-64=2.12=he073ed8_15
  - tabulate=0.9.0=pyhd8ed1ab_1                       - tabulate=0.9.0=pyhd8ed1ab_1
  - throttler=1.2.1=pyhd8ed1ab_0                      - throttler=1.2.1=pyhd8ed1ab_0
  - tk=8.6.12=h27826a3_0                          - tk=8.6.12=h27826a3_0
  - toml=0.10.2=pyhd8ed1ab_0                          - toml=0.10.2=pyhd8ed1ab_0
  - tomli=2.0.1=pyhd8ed1ab_0                          - tomli=2.0.1=pyhd8ed1ab_0
  - toolz=0.12.0=pyhd8ed1ab_0                         - toolz=0.12.0=pyhd8ed1ab_0
  - toposort=1.7=pyhd8ed1ab_0                         - toposort=1.7=pyhd8ed1ab_0
  - tornado=6.2=py310h5764c6d_1                       - tornado=6.2=py310h5764c6d_1
  - tqdm=4.64.1=pyhd8ed1ab_0                          - tqdm=4.64.1=pyhd8ed1ab_0
  - traitlets=5.5.0=pyhd8ed1ab_0                      - traitlets=5.5.0=pyhd8ed1ab_0
  - typing-extensions=4.4.0=hd8ed1ab_0                    - typing-extensions=4.4.0=hd8ed1ab_0
  - typing_extensions=4.4.0=pyha770c72_0                  - typing_extensions=4.4.0=pyha770c72_0
  - tzdata=2022f=h191b570_0                       - tzdata=2022f=h191b570_0
  - ubiquerg=0.6.2=pyhd8ed1ab_0                       - ubiquerg=0.6.2=pyhd8ed1ab_0
  - unicodedata2=15.0.0=py310h5764c6d_0                   - unicodedata2=15.0.0=py310h5764c6d_0
  - uritemplate=4.1.1=pyhd8ed1ab_0                    - uritemplate=4.1.1=pyhd8ed1ab_0
  - urllib3=1.26.13=pyhd8ed1ab_0                |         - urllib3=1.26.11=pyhd8ed1ab_0
  - veracitools=0.1.3=py_0                        - veracitools=0.1.3=py_0
  - wcwidth=0.2.5=pyh9f0ad1d_2                        - wcwidth=0.2.5=pyh9f0ad1d_2
  - wheel=0.38.4=pyhd8ed1ab_0                         - wheel=0.38.4=pyhd8ed1ab_0
  - wrapt=1.14.1=py310h5764c6d_1                      - wrapt=1.14.1=py310h5764c6d_1
  - xcb-util=0.4.0=h166bdaf_0                   |         - xcb-util=0.4.0=h516909a_0
  - xcb-util-image=0.4.0=h166bdaf_0                   - xcb-util-image=0.4.0=h166bdaf_0
  - xcb-util-keysyms=0.4.0=h166bdaf_0               |         - xcb-util-keysyms=0.4.0=h516909a_0
  - xcb-util-renderutil=0.3.9=h166bdaf_0                  - xcb-util-renderutil=0.3.9=h166bdaf_0
  - xcb-util-wm=0.4.1=h166bdaf_0                |         - xcb-util-wm=0.4.1=h516909a_0
  - xorg-fixesproto=5.0=h7f98852_1002                     - xorg-fixesproto=5.0=h7f98852_1002
  - xorg-inputproto=2.3.2=h7f98852_1002                   - xorg-inputproto=2.3.2=h7f98852_1002
  - xorg-kbproto=1.0.7=h7f98852_1002                      - xorg-kbproto=1.0.7=h7f98852_1002
  - xorg-libice=1.0.10=h7f98852_0                     - xorg-libice=1.0.10=h7f98852_0
  - xorg-libsm=1.2.3=hd9c2040_1000                    - xorg-libsm=1.2.3=hd9c2040_1000
  - xorg-libx11=1.7.2=h7f98852_0                      - xorg-libx11=1.7.2=h7f98852_0
  - xorg-libxau=1.0.9=h7f98852_0                      - xorg-libxau=1.0.9=h7f98852_0
  - xorg-libxdmcp=1.1.3=h7f98852_0                    - xorg-libxdmcp=1.1.3=h7f98852_0
  - xorg-libxext=1.3.4=h7f98852_1                     - xorg-libxext=1.3.4=h7f98852_1
  - xorg-libxfixes=5.0.3=h7f98852_1004                    - xorg-libxfixes=5.0.3=h7f98852_1004
  - xorg-libxi=1.7.10=h7f98852_0                      - xorg-libxi=1.7.10=h7f98852_0
  - xorg-libxrender=0.9.10=h7f98852_1003                  - xorg-libxrender=0.9.10=h7f98852_1003
  - xorg-libxtst=1.2.3=h7f98852_1002                      - xorg-libxtst=1.2.3=h7f98852_1002
  - xorg-recordproto=1.14.2=h7f98852_1002                 - xorg-recordproto=1.14.2=h7f98852_1002
  - xorg-renderproto=0.11.1=h7f98852_1002                 - xorg-renderproto=0.11.1=h7f98852_1002
  - xorg-xextproto=7.3.0=h7f98852_1002                    - xorg-xextproto=7.3.0=h7f98852_1002
  - xorg-xproto=7.0.31=h7f98852_1007                      - xorg-xproto=7.0.31=h7f98852_1007
  - xz=5.2.6=h166bdaf_0                           - xz=5.2.6=h166bdaf_0
  - yaml=0.2.5=h7f98852_2                         - yaml=0.2.5=h7f98852_2
  - yaml-cpp=0.7.0=h27087fc_2                         - yaml-cpp=0.7.0=h27087fc_2
  - yarl=1.8.1=py310h5764c6d_0                        - yarl=1.8.1=py310h5764c6d_0
  - yte=1.5.1=py310hff52083_1                         - yte=1.5.1=py310hff52083_1
  - zipp=3.11.0=pyhd8ed1ab_0                    |         - zipp=3.10.0=pyhd8ed1ab_0
  - zlib=1.2.13=h166bdaf_4                        - zlib=1.2.13=h166bdaf_4
  - zstd=1.5.2=h6239696_4                         - zstd=1.5.2=h6239696_4
  - pip:                                  - pip:
    - click==8.1.3                              - click==8.1.3
    - cloudpickle==2.2.0                            - cloudpickle==2.2.0
                                >           - dadi==2.2.0
    - dadi-cli==0.8.1                               - dadi-cli==0.8.1
    - dask==2022.11.1                               - dask==2022.11.1
    - demes==0.2.2                              - demes==0.2.2
    - fsspec==2022.11.0                             - fsspec==2022.11.0
                                >           - googleapis-common-protos==1.57.0
    - humanize==4.4.0                               - humanize==4.4.0
    - locket==1.0.0                             - locket==1.0.0
    - msprime==1.2.0                                - msprime==1.2.0
    - newick==1.3.2                             - newick==1.3.2
    - partd==1.3.0                              - partd==1.3.0
    - pyslim==1.0.1                             - pyslim==1.0.1
    - ruamel-yaml==0.17.21                          - ruamel-yaml==0.17.21
    - ruamel-yaml-clib==0.2.7                           - ruamel-yaml-clib==0.2.7
    - scikit-allel==1.3.5                           - scikit-allel==1.3.5
    - stdpopsim==0.2.1.dev11+ga229273               |           - stdpopsim==0.2.1.dev11+ga229273.d20221129
    - svgwrite==1.4.3                               - svgwrite==1.4.3
    - tskit==0.5.3                              - tskit==0.5.3
prefix: /projects/kernlab/stittes/miniconda3/envs/analysi       <
andrewkern commented 1 year ago

@silastittes - i'm going to close this as others are running the pipeline without issue. feel free to reopen