Anolis carolinensis

[Vcaudill]

• Anolis carolinensis: scientific name of the species
• Green anole:

Description: Lizard that lives in the southeastern United States. These lizards can change color.

Demographic information:

• [1.5] generation time in years Lovern et al. 2004
• [2e6] "default" population size predicted by Bourgeois Fig 2a

Chromosome structure:

• [Anolis_carolinensis] ensembl assembly ID

Recombination rates:

• [] genetic map of recombination rates (as a hapmap or csv file)
• [] genome-wide mean recombination rate (which will be used as the default) tbd

Mutation rate:

• [ 2.1e−10 ] genome-wide mean mutation rate Bourgeois

Demographic model:

• [] as a list of population sizes, growth rates, migration rates, etcetera. (optional)
• [] citation

Other information: Cool paper about recombination might also have a demographic model Bourgeois

These are things we don't currently use, but will want to use in the future:

• [XY] sex determination system, and which chromosomes are the sex chromosome(s)
• [diploid] ploidy

[petrelharp]

Looks good! Next thing is to start a pull request?

[grahamgower]

Anolis carolinensis is in!