Open GoogleCodeExporter opened 8 years ago
1. version BSMAP v2.43 2. command bsmap -a sample1.fq -d mm9.fa -o sample1.bam -p 6 -w 100 -s 12 -v 3 -D C-CGG -z 64 -m 18 -x 1000 3. results the output file sample1.bam is actually uncompressed sam file. The tail of the log file : " 64600000 reads finished. 3287 secs passed 64650000 reads finished. 3288 secs passed Total number of aligned reads: 59487498 (92%) Done. Finished at Wed Feb 22 22:44:19 2012 Total time consumed: 3290 secs "
Original issue reported on code.google.com by gcxies...@gmail.com on 23 Feb 2012 at 9:33
gcxies...@gmail.com
Original issue reported on code.google.com by
gcxies...@gmail.com
on 23 Feb 2012 at 9:33