populationgenomics / automated-interpretation-pipeline

Rare Disease variant prioritisation MVP

MIT License

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Additional Latest-only report #315

Closed MattWellie closed 8 months ago

MattWellie commented 8 months ago

Fixes

Current report format doesn't make separating 'all' and 'latest only' variants easy
Some double counting was going on

Proposed Changes

Adds a second report, filtered to only the variants newly discovered in this run
Report index script now creates two HTML pages
- One index contains the latest version of the report for each cohort, containing all variants
- One index contains all 'latest only' reports, one for each interval
Cuts out a bunch of rubbish in the counting process

Checklist

[x] Related Issue created
[x] Tests covering new change
[x] Linting checks pass