populationgenomics / production-pipelines

Genomics workflows for CPG using Hail Batch
MIT License
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Run Exomiser 14 #713

Closed MattWellie closed 5 months ago

MattWellie commented 5 months ago

This implements Exomiser 14, married up with these PRs.

Based on developer input we're dropping CADD and REMM for default running, though code to implement these is still present in the exomiser_13 method if we need the template for the future. I've segregated the input and output folders for exomiser 13/14 so that we don't accidentally mix up results.

Test run: https://batch.hail.populationgenomics.org.au/batches/444875/jobs/1