AIP - use only subset of SV VCFs

populationgenomics / production-pipelines

Genomics workflows for CPG using Hail Batch

MIT License

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Closed MattWellie closed 5 months ago

MattWellie commented 5 months ago

a wayward " was leading to filenames as input getting all messed up
we only want the outputs from AnnotateDataset[SV/CNV] - the MT which was subset'ed down to a specific project group of samples