Takes the default pedigree we write from Metamist info
Takes the Tar-ball of DetermineContigPloidy outputs
parses the tar contents to find the inferred X/Y ploidy
Uses the ploidy counts to identify inferred 0/Unknown, 1/Male, 2/Female
Updates attributes in the pedigree and writes a new file
Takes the default pedigree we write from Metamist info Takes the Tar-ball of DetermineContigPloidy outputs parses the tar contents to find the inferred X/Y ploidy Uses the ploidy counts to identify inferred 0/Unknown, 1/Male, 2/Female Updates attributes in the pedigree and writes a new file