populationgenomics / production-pipelines

Genomics workflows for CPG using Hail Batch
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No datasets populated with Cohorts run #776

Open vivbak opened 1 month ago

vivbak commented 1 month ago

Batch: https://batch.hail.populationgenomics.org.au/batches/454722/jobs/1 cpg_workflows.metamist.MetamistError: No datasets populated

This issue appears in production pipelines, so I'm logging the ticket here. Although the fix is in metamist.

If a cohort has no sequencing groups within it, this error message will come up.

We can still modify the error message in prod pipes to make it more informative!

First reported by @MattWellie