Closed MattWellie closed 1 week ago
splits the bam2cram an SV annotation workflows for long-read data
I put this into the Bam2Cram long-read workflow, but... that's not really appropriate.
At some point we would probably harmonise the two in an e2e long-read workflow, but right now there's no connection.
Instead of adding Stages from two separate workflows in one file, I'm splitting into a separate Stage source file
splits the bam2cram an SV annotation workflows for long-read data
801 added a process to take long-read SV data we already have on file, merge and annotate.
I put this into the Bam2Cram long-read workflow, but... that's not really appropriate.
At some point we would probably harmonise the two in an e2e long-read workflow, but right now there's no connection.
Instead of adding Stages from two separate workflows in one file, I'm splitting into a separate Stage source file