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prefixcommons / biocontext

JSON-LD Contexts for Bioinformatics Data
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SKOS URI does not match specification #26

Open hsolbrig opened 4 years ago

hsolbrig commented 4 years ago

Both monarch_context and commons_context use "https://www.w3.org/TR/skos-reference/#" as the URI for SKOS. https://www.w3.org/TR/2009/REC-skos-reference-20090818/#vocab specifies that the URI should be http://www.w3.org/2004/02/skos/core#

cmungall commented 3 years ago

This is a problem with the upstream source

can you or @kshefchek make a PR on this: https://github.com/monarch-initiative/dipper/blob/master/dipper/curie_map.yaml

(ideally this would be reported on the dipper tracker)

then we will remake the derived artefacts (we really need a gh-actions to do this)

commons_context is a remix artefact, so it should be fixed once we rebuild. There is an argument for prioritizing semweb>monarch here

cmungall commented 3 years ago

we need a CONTRIBUTING.md for this project that explains how to fix upstreams etc

kshefchek commented 3 years ago

this is already correct in dipper, or am I misreading? https://github.com/monarch-initiative/dipper/blob/master/dipper/curie_map.yaml#L20