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prescient-design / lobster

Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation
https://prescient-design.github.io/lobster/
Apache License 2.0
27 stars 1 forks source link

Static site link #4

Open alexj-lee opened 3 months ago

alexj-lee commented 3 months ago

Thanks a lot for sharing this codebase. Cool paper--I am eager to see the specific data used in the paper when it is done being prepared.

I noticed the provided static site URL points to nowhere. I think this might be the correct link: https://prescient-design.github.io/lobster/

Also, I noticed that the script at src/lobster/cmdline/_train.py explicitly logs in to genentech.wandb.io in the wandb.login().

Would you be open to parameterizing the host in the src/lobster/hydra_config/logger/wandb.yaml file instead? It would make the repo marginally more usable to newcomers, although I understand if you prefer end-users implement their own train script.

ncfrey commented 2 months ago

@alexj-lee Thanks for raising these issues! I will make that change - feel free to open a PR as well if you get to it before me.