programmablebio / ptm-mamba

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Missing File in 'zero_shot_vis.ipynb' Script for Further Analysis #4

Open um-scripts opened 2 months ago

um-scripts commented 2 months ago

Hello,

I'm working with the script 'zero_shot_vis.ipynb' located in the 'protein_lm -> evaluation/zeroshot_ptm_prediction' folder. I recently ran PTM Mamba and successfully generated the output logits. However, I'm unable to locate this ptm_data.csv file referenced in the script, which is essential for conducting further analysis.

Could you please provide guidance on where to find this file or how to proceed? Your assistance would be greatly appreciated.

Thanks.