projectglow / glow

An open-source toolkit for large-scale genomic analysis
https://projectglow.io
Apache License 2.0
262 stars 106 forks source link

Add option to manually specify sample ids #650

Closed henrydavidge closed 3 months ago

henrydavidge commented 3 months ago

What changes are proposed in this pull request?

Resolves #472 #473

How is this patch tested?

(Describe any other testing)

To run Spark 4.0 tests, add [SPARK4] to the pull request title.

codecov[bot] commented 3 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 92.36%. Comparing base (d492318) to head (bd70b41). Report is 1 commits behind head on main.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #650 +/- ## ======================================= Coverage 92.35% 92.36% ======================================= Files 126 126 Lines 7368 7372 +4 Branches 625 633 +8 ======================================= + Hits 6805 6809 +4 Misses 563 563 ``` | [Flag](https://app.codecov.io/gh/projectglow/glow/pull/650/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=projectglow) | Coverage Δ | | |---|---|---| | [unittests](https://app.codecov.io/gh/projectglow/glow/pull/650/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=projectglow) | `92.36% <100.00%> (+<0.01%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=projectglow#carryforward-flags-in-the-pull-request-comment) to find out more.

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