Expand Organism Detection to Return an Organism Object

proksee-project / proksee-cmd

Repo for Proksee Cmd Line Tools

Apache License 2.0

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Expand Organism Detection to Return an Organism Object #11

Closed emarinier closed 4 years ago

emarinier commented 4 years ago

Currently, the method responsible for identifying an organism (OrganismDetection.major_organism) returns a string identifying the most abundant organism in the data. However, if it instead returned a newly-created Organism object, it might be easier to perform operations on that object, such as determine the high-order classifications.

ericenns commented 4 years ago

I agree, this will be important as the expert system is developed.

emarinier commented 4 years ago

In progress in dev/assembly_expert_system