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proksee-project / proksee-cmd

Repo for Proksee Cmd Line Tools
Apache License 2.0
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Merge dev/testing into develop #44

Closed emarinier closed 3 years ago

emarinier commented 3 years ago

This pull request expands the testing coverage of many files.

It also adds two small fixes, found when testing:

  1. An issue where FASTQ-format checking only cared about whether the 4th line of the record was accurate.
  2. An issue where cmd_evaluate.py was not creating the output directory when it was missing.